Paraburkholderia caledonica: CUJ87_11820
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Entry
CUJ87_11820 CDS
T05740
Name
(GenBank) RND transporter
KO
K18139
outer membrane protein, multidrug efflux system
Organism
pcj
Paraburkholderia caledonica
Pathway
pcj01501
beta-Lactam resistance
pcj02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pcj00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CUJ87_11820
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
CUJ87_11820
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcj02000
]
CUJ87_11820
01504 Antimicrobial resistance genes [BR:
pcj01504
]
CUJ87_11820
Transporters [BR:
pcj02000
]
Other transporters
Pores ion channels [TC:
1
]
CUJ87_11820
Antimicrobial resistance genes [BR:
pcj01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
CUJ87_11820
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
CUJ87_11820
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
CUJ87_11820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
DUF7537
Motif
Other DBs
NCBI-ProteinID:
AXF15011
LinkDB
All DBs
Position
PHRS4_A:2697795..2699453
Genome browser
AA seq
552 aa
AA seq
DB search
MQSPVLTRIAASAVLTILLTIAGCANTGGIAPQASGTDAASLDAGNAIRAANADAQWPAA
DWWRAYNDPQLDAWIETAQANNPSLAAAQARVRQAMSMAGVARSAMSPQVNGHLSIQRQK
WADNLYYGPGPLAGEQSWNNTGTLALSYHLDLWGKDKNAAERALDAAHASAADARAAQLE
LQANVVRTYIEMSLDYALLDIARATLQQQQQIADLARRRLKGGIGTQLEVSQAETPLPEY
ERQIDSIEENIALSRNQLAALAGKGPGAGDSIQRPVLSLGAPAGLPSALPAELIGHRPDV
VAARWTVAAQARGIDVAKAEFYPDIDLLASIGGYAAMGPLFQFLKNPSHSWSAGPALSLP
IFDGGRLRSQLGAASADYDEAVERYNQSIVGALKDISDQVIRMRSLATQAQDADRSVAAA
RKNYELSREGYRRGLTDYLNVLIAQNQLLRAQEGVARIQAERLGVHASLVTALGGGIDDP
ANGPQADQTLPEHGKGKAAVQPSHATAVKAAVAPAAMGTAGERNADPAANTTRKRAAALS
HADTGNAASAAE
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
gtgcagtctccggtactaacaaggatcgccgcatctgcggtgcttacgatcctattaaca
atcgccggctgcgcaaataccggaggcatcgccccccaggcgagcggcacagacgcggcg
tcgctcgacgccggcaacgccattcgcgcggcgaacgccgacgcgcaatggcctgccgcc
gactggtggcgcgcctacaacgacccgcaactcgacgcatggatcgagaccgcacaggcg
aacaatccgagcctcgccgccgctcaggcgcgcgtgcgccaggccatgtcgatggcgggc
gtcgcgcgctcggcaatgtcgccgcaagtgaacggccatctgtcgatccagcgtcagaag
tgggccgacaacctctactacggtcccgggccgctcgcgggcgagcagtcgtggaacaac
accggcacgctcgcgctgtcctatcacctcgatctgtggggcaaggacaagaacgccgcc
gaacgcgctctggacgccgcgcatgccagcgccgccgatgcccgcgccgcccaactcgaa
ctccaggccaacgtggtgcgcacttacatcgagatgtcgctggattacgcgctcctcgac
atcgctcgcgccaccttgcaacaacagcagcaaatcgccgacctggcccgccggcgcctg
aaaggcggcatcggcacgcagctcgaagtaagccaggccgaaacgccgctgccggaatac
gaacgccagatcgactccatcgaagaaaacattgcgttgagccgcaatcaactcgccgcg
ctggccggcaagggtcccggcgcgggcgactcgatccagcggccggtcttgtcgctcggc
gcgcctgccggcttgccgagcgccctgcccgcggagttgatcgggcatcggccggacgtg
gttgccgcgcgctggacagtcgcggcacaggcgcgcggcatcgacgtcgcgaaagccgag
ttctatccggatatcgatctgctcgcgtcgatcggcggttatgcggcaatggggccgctg
ttccagttcctgaagaatccttcgcatagctggagcgccggaccggcgctgtcgctgccg
attttcgacggcggccggctgcgctcgcagctcggcgcagcgtcggccgattacgacgag
gcggtggagcgctacaaccagtcgatcgtcggcgcgctgaaggacatctcggatcaggtc
atccgcatgcgttcgctcgcgacccaagcgcaagacgccgaccgttcggtcgccgctgcg
cgcaaaaactacgaactctcgcgtgaaggttatcgacgcggtttgaccgactatctcaac
gtgctgatcgcgcagaatcagttgcttcgggctcaggaaggcgtggccaggattcaggcc
gagcggctcggcgtgcatgcgtcgctggtcacggctctgggcggcgggatcgacgatccg
gccaacggtccgcaagcggaccagactctgccagagcatggtaagggcaaggccgccgtg
caaccgtcgcacgcgactgccgtaaaagcagcggttgcgcctgccgcgatgggcacggcg
ggcgagcgcaacgcagaccccgcagcgaacactacgcggaagcgcgcggcggcgctcagc
catgcggacaccggcaacgccgcgtcggctgccgaataa
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