Paraprevotella clara: PC1C4_27560
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Entry
PC1C4_27560 CDS
T08732
Name
(GenBank) membrane protein
KO
K12340
outer membrane protein
Organism
pclr
Paraprevotella clara
Pathway
pclr01501
beta-Lactam resistance
pclr01503
Cationic antimicrobial peptide (CAMP) resistance
pclr02020
Two-component system
pclr03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
pclr00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
PC1C4_27560
09132 Signal transduction
02020 Two-component system
PC1C4_27560
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
PC1C4_27560
01503 Cationic antimicrobial peptide (CAMP) resistance
PC1C4_27560
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pclr02000
]
PC1C4_27560
02044 Secretion system [BR:
pclr02044
]
PC1C4_27560
01504 Antimicrobial resistance genes [BR:
pclr01504
]
PC1C4_27560
Transporters [BR:
pclr02000
]
Other transporters
Pores ion channels [TC:
1
]
PC1C4_27560
Secretion system [BR:
pclr02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
PC1C4_27560
RTX toxin transporter
PC1C4_27560
Multiple protein transporter
PC1C4_27560
RaxAB-RaxC type I secretion system protein
PC1C4_27560
Antimicrobial resistance genes [BR:
pclr01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
PC1C4_27560
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
PC1C4_27560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
DUF6082
Motif
Other DBs
NCBI-ProteinID:
BDI76034
LinkDB
All DBs
Position
complement(3694691..3696181)
Genome browser
AA seq
496 aa
AA seq
DB search
MDIRMRIGCVACAACWGMGMAAQPLPPSGGWGLDDVVLRACQSSPDALAARHTFRSAYWD
YRSFRADYLPSLTLTSGPNLDRSINQITMEDGSVRFVEQNLLNTDLSLRVQQNVSWTGGT
LSLESSLLRTDLLSDRTFSWKSVPVNIGYSQSLFGYNNLKWRRRIEPVRYEEAQRSYLET
MELVAARAVDKFFALAMAQSNYATACQNFAHADTLYRFAQGRYQIGTTTENEMLQLEINR
LNEETNRLNARIEMDECALELRSYLGLHEGDTLPAIRMVTEVPDVMVEEGAALQWAHLHS
PDILYMKRRKLEAESNVAQAKANAGLKADLYLRFGLTQTAENFSSTYRHPLDQQAVSIGI
TLPILDWGKGRGQVRVARSQQDLVETQVEQSRTDFDQNIRKLVGQFNLQGLRVRVAARTD
STALRRSEVARRLYVLGKSSVLDLNASIEEKDAARRNYLNALHTYWSLYYTLRSLTLYDF
FEGRPLQVDYGQLVKD
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atggacatcagaatgcggataggatgcgtggcatgtgcggcgtgctggggcatggggatg
gcggcacagcctcttccgccctcgggcggttggggactggacgacgtggtactccgggcc
tgccagtcttcgcccgacgcgttggccgcgcgccatacattccgctcggcctattgggac
tatcgctcgttccgggctgattacttgccttccctcacattgacttccgggccgaacctc
gaccgttccatcaaccaaatcacgatggaagacgggtcggtgcgtttcgtcgagcaaaac
ctgttgaacactgacttgtccctgcgtgtgcagcagaatgtcagttggacgggtggcacg
ttgtccttggaatcctccctcttgcgtacggatttgctgagcgaccgcactttttcatgg
aagagcgtgccggtcaacatcggctacagccagtcgcttttcgggtacaacaacctgaag
tggaggcggcgcatcgaaccggtgcgctacgaagaggcgcagcggtcttatctggagacg
atggagctggtagccgcacgggccgtggacaagttcttcgcgttggccatggcacagagc
aactatgccacggcgtgccagaatttcgcccatgccgacacgctctaccgtttcgcacag
gggcgttaccagattggtacgaccaccgagaacgagatgctccaactcgaaatcaaccgc
ctgaacgaggagaccaaccggctgaatgcccgtatcgagatggacgagtgcgccttggaa
ttgcgttcctatctgggtttgcatgaaggcgataccttgcccgcgatacggatggtcacg
gaagtgcccgacgtgatggtggaggagggggcggccttgcagtgggcgcatctccacagt
cccgacatcctctacatgaagcggcgcaagttggaggcggaaagcaacgtggcgcaggcc
aaggccaacgccggcctgaaagccgacctgtatctccgtttcggtctgacgcagacggcg
gagaatttctcttccacctaccgccatccgctcgaccaacaggcggtgagcatcggtatc
accttgcccatcctggactggggaaaggggcgcggacaagtgcgcgtggcccgttcgcaa
caggacttggtggagacacaagtggagcagagccgcacggacttcgaccagaatattcgc
aagttggtagggcagttcaacctgcaagggctacgtgtgcgcgtggcggcccggacggac
agcacggccttgcgccgcagcgaagtggcacgccgcctgtacgtgttgggaaaatccagt
gtactcgacctcaacgcctctatcgaggagaaagatgccgcgcgccggaattacctgaac
gccctgcacacttactggagcctttactacaccctgcgcagcctgacgctctacgatttc
ttcgaaggccgcccgttgcaggtggattacgggcaactggtgaaagactga
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