Pedobacter cryoconitis: AY601_1558
Help
Entry
AY601_1558 CDS
T04341
Name
(GenBank) Outer membrane efflux protein
KO
K12340
outer membrane protein
Organism
pcm
Pedobacter cryoconitis
Pathway
pcm01501
beta-Lactam resistance
pcm01503
Cationic antimicrobial peptide (CAMP) resistance
pcm02020
Two-component system
pcm03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
pcm00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
AY601_1558
09132 Signal transduction
02020 Two-component system
AY601_1558
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
AY601_1558
01503 Cationic antimicrobial peptide (CAMP) resistance
AY601_1558
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcm02000
]
AY601_1558
02044 Secretion system [BR:
pcm02044
]
AY601_1558
01504 Antimicrobial resistance genes [BR:
pcm01504
]
AY601_1558
Transporters [BR:
pcm02000
]
Other transporters
Pores ion channels [TC:
1
]
AY601_1558
Secretion system [BR:
pcm02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
AY601_1558
RTX toxin transporter
AY601_1558
Multiple protein transporter
AY601_1558
RaxAB-RaxC type I secretion system protein
AY601_1558
Antimicrobial resistance genes [BR:
pcm01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
AY601_1558
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
AY601_1558
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
HMD
Motif
Other DBs
NCBI-ProteinID:
AMP98473
UniProt:
A0A127VAU6
LinkDB
All DBs
Position
complement(1798578..1799885)
Genome browser
AA seq
435 aa
AA seq
DB search
MCLLHLHVFAQQKWDLKECIDYGLEHNRNTAVYENEKKAADAKAKEALSDYLPKISVSAT
LEDNLKVQESVIPAGVFGPTDIRVAFSQKFNSNGLAQLDQTIYDQSLLNGLKANQYAKEQ
AGLNIVRSQETIIYNIGNAYYQIIVYREQLRLLRENLETYQKQIDISALQVKKGVTLKKD
LDKVTVDYNNAVSQIRVAESNLTLAENQLKYEMGYPMTDQLQVENPSVEGLSAVVRPDLD
SKGFLADKRTDYQLSQVNAKLLEIDQKRIKAGALPKLSGYARYGAVGFGNTIGPAFKDLS
PYAVIGIKLSIPLFDFFKRNAQYNQAKYKSLNAVENMKLDEGKYEMEYQNAKTKMFKAKS
SLESDRRNIDLVQSVFKITDLQYKKGVENLTEWLNTQNSIKEAQNNYLNSLYSFLQARLD
LEKAAGSLKTFYTSL
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgtgcttgctgcatctccatgtatttgcacaacagaaatgggacctgaaagaatgcatc
gattatgggctggagcataaccgcaatactgctgtttatgagaacgaaaagaaagctgct
gatgcgaaagccaaagaggcgctttccgattatttacctaaaattagcgtctcagcaact
ttagaagacaatctaaaggttcaggaatctgttattccagccggtgtattcggcccaacg
gatattcgtgtagcttttagtcagaaattcaatagcaatggtctggcccagctcgatcag
acaatttatgatcagtcgctgttaaatggcttaaaagctaatcagtatgcgaaagaacaa
gcgggtctgaatatcgtcaggagccaggaaactatcatttataatattggtaatgcctat
tatcaaatcattgtatacagggagcaattgcggttgctgcgtgaaaatttagagacttac
caaaagcagatcgatatttctgcattacaggtaaaaaagggggtgacccttaaaaaagat
ctggataaggttaccgttgattataataacgcagtttctcagatccgcgtggcagaaagt
aacctgacccttgccgaaaatcagcttaagtacgaaatgggctatccgatgacggatcag
ttacaggtggaaaacccttccgtagaaggcctgagtgctgtagtacgtccggatttggac
agtaaaggctttttagcggacaaaaggacagattatcagctttcccaggtgaatgctaaa
cttttggagatagaccaaaagaggatcaaggcaggagcgcttcctaaacttagtggatat
gccaggtatggtgcagttggatttggtaatacgatcggcccggcctttaaagatttaagt
ccatatgctgttatcgggattaaactaagcattccgttgttcgatttctttaagcgcaat
gcgcagtacaatcaggcgaagtataaaagcctgaatgctgtagaaaatatgaaattagac
gaaggtaaatatgaaatggaatatcagaatgccaagactaaaatgtttaaggctaagagc
agtctggaaagtgaccggaggaatattgatctggtacaatctgtattcaagataactgat
ttgcaatataaaaaaggtgttgaaaatttaacggagtggctaaatacacaaaactcaatt
aaagaagcgcaaaataattacctcaattctctttatagtttcctgcaggccagattagac
ctggaaaaagcggcaggtagtcttaaaacattttacacctcactttaa
DBGET
integrated database retrieval system
