Pedobacter cryoconitis: AY601_2465
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Entry
AY601_2465 CDS
T04341
Name
(GenBank) RND transporter
KO
K18139
outer membrane protein, multidrug efflux system
Organism
pcm
Pedobacter cryoconitis
Pathway
pcm01501
beta-Lactam resistance
pcm02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pcm00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
AY601_2465
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
AY601_2465
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcm02000
]
AY601_2465
01504 Antimicrobial resistance genes [BR:
pcm01504
]
AY601_2465
Transporters [BR:
pcm02000
]
Other transporters
Pores ion channels [TC:
1
]
AY601_2465
Antimicrobial resistance genes [BR:
pcm01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
AY601_2465
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
AY601_2465
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
AY601_2465
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
AMP99355
UniProt:
A0A127VDI8
LinkDB
All DBs
Position
complement(2932345..2933757)
Genome browser
AA seq
470 aa
AA seq
DB search
MKPYKSIYTALLLVLVLGACKVSKDIPLPVNAAPEKFRGSISTDTASIAALPYKDFFKEQ
TIRNLIDTAIVNNYDMQIALKNMEAAALLFSQSKLGNLPELNLKVGANSSRPSDNSLNGL
QIGQFSQSKHIEDYNVTGGLSWEADIWRKIANQRNAAGAAFMQSAEVKKAVQTRLVSNIA
QSFYRLIMLDTQLEIAKKNLSLNDSTLNIIRLQFDAGQVTSLAIQQAEAQQLVAAGLVPQ
LEQRIALEENALSILTGAFPKTIARIGTLNSINVQDQVSTGIPSRMLSLRPDVKSAELEL
VKANAKVGIAKAGLYPSLLITANGGLNSFKASNWFNIPGSLFGVVAGGITQPIFQRKQLR
TQYEVALVDRERSVIQFRSSVLTAVGEVSDELVKIEKLKQQYVIADKRVKTVQSGLSNAN
MLFKSGMANYLEVINAQSNALQSELDLATVKTAQLNAVVELYRALGGGWK
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccgtataaaagtatatatactgctcttttacttgtactcgtgctgggtgcttgt
aaagtatctaaagatattcccttaccagtaaatgctgctcctgaaaaattcaggggtagt
atttcaactgatacggcgagtattgcagcactgccttataaagatttttttaaggaacag
acaatcagaaacctgattgatactgcaatcgtaaataattatgatatgcagattgcattg
aaaaatatggaagctgcggctttgttatttagtcagtcaaaattgggtaatttacctgag
ttaaatttgaaggttggggcaaattcaagccgtccttcggataatagtttgaatgggttg
cagattggccagttttctcagtcaaaacatattgaagattataatgtaactggcggatta
agctgggaggcagatatctggcgtaaaattgcgaaccagagaaatgcagcaggtgcggct
tttatgcagtctgctgaggttaaaaaagctgttcaaaccaggttagtctcgaatattgca
cagagtttttatagattgatcatgttggatactcaactggaaatcgctaagaagaacttg
tctttaaatgatagtacgttaaatattatcaggttacagtttgatgcgggtcaggtgact
tcattagcaattcaacaagctgaggcgcaacagttggttgctgctggtctggttcctcaa
ttggagcaaagaatagctttggaagagaatgctttgagtattttaacgggtgctttccct
aaaactattgcaaggatcggaactttaaattcgatcaatgttcaggatcaggtgagtact
ggtattccttcccgcatgttaagtttaagacctgatgtgaaaagtgcagagctggagtta
gtgaaagcaaatgcgaaggttgggattgccaaagcaggtttatatccttctcttttgatt
actgcgaatggtggtttgaattcgtttaaggcgagtaactggtttaatattccaggttca
ttgtttggtgtggttgctggtgggattacgcagccaatttttcagcgtaaacagttaagg
actcaatatgaggttgctttggttgaccgtgagagatcagtgatccagttcagatcttcg
gttttgactgcggttggtgaggtttctgatgagctggttaagattgagaagttgaagcag
cagtatgtgattgctgataaaagggtgaagactgtgcagagtggtttgagtaatgcgaat
atgttgtttaagagtggcatggcaaattacttggaagtgattaatgcgcagagtaatgcg
ttgcagagtgagctggatttagcaactgtaaagactgcgcagttgaatgcggtagttgaa
ttgtacagggctttaggtgggggttggaagtaa
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