Pectobacterium colocasium: PJ912_14860
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Entry
PJ912_14860 CDS
T08961
Symbol
tolC
Name
(GenBank) outer membrane channel protein TolC
KO
K12340
outer membrane protein
Organism
pcoa
Pectobacterium colocasium
Pathway
pcoa01501
beta-Lactam resistance
pcoa01503
Cationic antimicrobial peptide (CAMP) resistance
pcoa02020
Two-component system
pcoa03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
pcoa00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
PJ912_14860 (tolC)
09132 Signal transduction
02020 Two-component system
PJ912_14860 (tolC)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
PJ912_14860 (tolC)
01503 Cationic antimicrobial peptide (CAMP) resistance
PJ912_14860 (tolC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcoa02000
]
PJ912_14860 (tolC)
02044 Secretion system [BR:
pcoa02044
]
PJ912_14860 (tolC)
01504 Antimicrobial resistance genes [BR:
pcoa01504
]
PJ912_14860 (tolC)
Transporters [BR:
pcoa02000
]
Other transporters
Pores ion channels [TC:
1
]
PJ912_14860 (tolC)
Secretion system [BR:
pcoa02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
PJ912_14860 (tolC)
RTX toxin transporter
PJ912_14860 (tolC)
Multiple protein transporter
PJ912_14860 (tolC)
RaxAB-RaxC type I secretion system protein
PJ912_14860 (tolC)
Antimicrobial resistance genes [BR:
pcoa01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
PJ912_14860 (tolC)
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
PJ912_14860 (tolC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Csm1
Ribosomal_S5_C
GA
Motif
Other DBs
NCBI-ProteinID:
WED67699
LinkDB
All DBs
Position
complement(2895483..2896874)
Genome browser
AA seq
463 aa
AA seq
DB search
MKKLLPLLIGLSLGGFSAMSQAENLLQVYQQAKSTNPDLRSAAATRDAAFEKINESRSPL
LPQLNLGADYTYNRGYRDSKGVDSNVKGASLQLTQTLFDMSKWRALTLQEKQAGIEDVVY
QTAQQNLMLNTATAYFNVLRAIDSLSYINAQKQAIYRQLDQTTQRFNVGLVAITDVQNAR
AQYDSVLANEVLTRNTLDNALESLRQITGNFYPQLAGLNIERFSTQKPEAVNNLLKEAEN
RNLNLLSARLSQDLAREQIRSAETGYMPTLDLTASTGVSDTRYSGSRTHSGNFNDTDAGQ
HRVGINFTLPLYSGGATNSQVKQAQHRYVSSSELLESAHRSVIQTVRSSFNNISASISSI
NAYKQAEVSAQSSLDAMEAGYQVGTRTIVDVLDATTTLYNAKQQLSSARYDYLINQLNIK
SAQGTLNEADLQALNASLGQPVSTTPTVTDNSAPQATTASAQR
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaattgctccctcttctgattggtctgagcctgggcggttttagcgccatgagt
caggcggaaaacctgttacaggtctaccagcaggcaaaaagcaccaaccctgatttacgc
agcgctgcggcaacccgcgacgccgcgtttgaaaagattaacgaatcacgtagcccgtta
ctgcctcaactcaatctaggggccgactatacctataacaggggctaccgtgacagcaaa
ggcgtcgacagcaatgtgaaaggcgcttcactgcaattgactcagaccttgttcgacatg
tccaaatggcgtgcgctgacgttgcaggaaaaacaagccggtatcgaagacgtcgtgtat
cagaccgctcagcaaaacctgatgctgaacacggcgaccgcctatttcaacgttctgcgt
gcgattgactcactgtcctacatcaatgcgcagaagcaggcgatttatcgccagttagac
caaacgacacagcgtttcaacgtgggtctggttgccattaccgacgtccagaacgctcgt
gcccagtatgacagcgtgttggccaatgaagtgttgacgcgtaatacgctggataacgcg
ttggaatcattgcgccagattaccggtaatttctacccgcagttggccggcctgaatatc
gagcgtttctctacgcagaagcctgaggccgttaacaacctgctgaaagaagcggaaaac
cgcaacctgaacctgttgtccgcacgtttgagccaggatttggctcgtgagcagattcgc
tccgccgaaacaggctacatgccaacgctggatctcaccgcgtctacaggggtcagcgat
actcgttattctggttcccgcacgcatagcggcaacttcaatgataccgacgcagggcaa
caccgagttggcattaacttcactctgccactttatagcggcggcgcgaccaattctcag
gtgaagcaagcacagcaccgctatgttagctcaagtgaactgctggaaagcgcacaccgt
tctgttatccaaacggtacgttcatcgtttaacaacatttcagcctccatcagcagcatc
aatgcttacaaacaggctgaagtgtctgcacaaagctctctggatgcaatggaagcaggt
tatcaggtaggaacacgtaccatcgttgacgttctggatgccaccaccacgctgtataac
gccaaacagcagctctccagcgcacgttatgattacctgatcaatcagttaaacatcaaa
tccgcgcagggcacgctgaatgaagccgatctacaagcgctgaacgcatcactgggtcag
ccggtttccaccacaccaaccgtaacggacaacagcgctccgcaggcaaccaccgcctcg
gcacagcgttaa
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