Segatella copri: LK433_13810
Help
Entry
LK433_13810 CDS
T07933
Name
(GenBank) TolC family protein
KO
K12340
outer membrane protein
Organism
pcoi
Segatella copri
Pathway
pcoi01501
beta-Lactam resistance
pcoi01503
Cationic antimicrobial peptide (CAMP) resistance
pcoi02020
Two-component system
pcoi03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
pcoi00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
LK433_13810
09132 Signal transduction
02020 Two-component system
LK433_13810
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
LK433_13810
01503 Cationic antimicrobial peptide (CAMP) resistance
LK433_13810
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcoi02000
]
LK433_13810
02044 Secretion system [BR:
pcoi02044
]
LK433_13810
01504 Antimicrobial resistance genes [BR:
pcoi01504
]
LK433_13810
Transporters [BR:
pcoi02000
]
Other transporters
Pores ion channels [TC:
1
]
LK433_13810
Secretion system [BR:
pcoi02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
LK433_13810
RTX toxin transporter
LK433_13810
Multiple protein transporter
LK433_13810
RaxAB-RaxC type I secretion system protein
LK433_13810
Antimicrobial resistance genes [BR:
pcoi01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
LK433_13810
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
LK433_13810
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
DUF3394
Motif
Other DBs
NCBI-ProteinID:
UEA43010
LinkDB
All DBs
Position
3296895..3298403
Genome browser
AA seq
502 aa
AA seq
DB search
MKKYITLIMLMGALIPVGAQAQTLSLDSCRAMALRNNKQLNASKLKKDVAYNMKKSARTK
YLPKVDALGGYEWFSREISLLNDGQKSTFSNIGSTVTGGISGGASNLLSQLVSQGMITPE
IAQQIGGLMNERLGPLQQQGNALGEKVVDAFRTDTRNIWAGSVMVRQPIYMGGAIIAANK
IADIGEQIAENDLDQQTQSTLYSIDQAYWLAVSLKQKQKLAISYRDLVKKLNEDVHKMIQ
QGVATKADGLKVDVKVNEAEMQITQAEDGLALSKMLLCQLCGIPMNQEITLADEDKETLA
LSGTPVDTEQQKVAAQDSALNTRPELRMLQNALDISKAATNMVRAINLPHVMLTGGYMIS
NPNVFNGFQKKFTGVWNVGVMVHVPVWNWFDGAYKVRAAKAASNIAQMNLDDTREKIHLQ
ITQSQFKVKEAQKKLNMAMKNIASADENLRCANLGFKEGVMEVTDVMAAQTAWQKAQSQK
IDAEIDVKLTQVGLNKALGILQ
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaatatataactcttatcatgctgatgggagcattgattcctgtcggggctcag
gcacaaacgctgagccttgacagttgccgtgccatggcgctgcgcaacaacaagcagctc
aatgcctcgaagctcaagaaagacgtggcgtacaacatgaagaaatcggcacgtaccaaa
tatcttcctaaagtagatgctttaggcggttacgaatggttcagcagggagatttcgctg
ctgaacgacggtcagaaatcaacattcagcaatatcggctctaccgttaccggaggcata
tcgggaggagccagcaatctgttgagccaacttgtaagtcagggaatgattaccccggag
atagcgcagcagataggcggactgatgaatgagagactgggacccctgcagcagcaaggc
aatgcgctgggagagaaagtggtagatgctttccgcaccgacacccgcaatatctgggca
ggaagcgtgatggttcgccaacctatctatatgggtggagccatcattgcagccaacaag
attgcagacatcggagagcagattgccgagaatgatctcgaccagcagacccagagcacg
ctctacagcatagaccaggcttactggctcgccgtttcgctgaagcagaagcagaaactc
gccatcagttaccgcgacctcgtaaagaaactgaacgaggatgttcataagatgattcag
cagggagtagccaccaaggcagacggactgaaggtagacgtgaaagtgaacgaggctgag
atgcagattacccaggcagaagacggactcgctctgtcgaagatgctgctctgccagctc
tgcggcattccgatgaaccaggaaatcacacttgccgatgaagataaggaaaccctggct
ttatcaggaactcctgttgacaccgagcagcagaaagtggcagcacaggattcggcactg
aacacccgtccggagctccgcatgctgcagaatgcgctcgacatctctaaagcagctacc
aatatggttcgcgccatcaatctgcctcacgtcatgctgacaggcggctacatgatttcg
aacccgaacgtattcaatggtttccagaagaagtttaccggagtctggaacgtaggcgtg
atggttcatgttccagtatggaactggttcgacggcgcctacaaggtgagagccgccaag
gctgccagcaatatcgcccagatgaacctggatgatacgagagagaagattcatctgcag
attacccaaagccagtttaaggtaaaggaagcccagaagaagctcaacatggcaatgaag
aacatcgccagtgcagatgagaacctgagatgcgccaacctcggtttcaaggaaggcgtg
atggaggttaccgacgtgatggctgcacagactgcctggcagaaagcacagagccagaag
attgatgcagaaatcgacgtgaagctgactcaggttgggctgaacaaggcgctcggtatc
ctgcagtaa
DBGET
integrated database retrieval system
