Pandoraea commovens: NTU39_08090
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Entry
NTU39_08090 CDS
T08365
Name
(GenBank) efflux transporter outer membrane subunit
KO
K18139
outer membrane protein, multidrug efflux system
Organism
pcom
Pandoraea commovens
Pathway
pcom01501
beta-Lactam resistance
pcom02024
Quorum sensing
Module
pcom_M00642
Multidrug resistance, efflux pump MexJK-OprM
Brite
KEGG Orthology (KO) [BR:
pcom00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
NTU39_08090
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
NTU39_08090
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcom02000
]
NTU39_08090
01504 Antimicrobial resistance genes [BR:
pcom01504
]
NTU39_08090
Transporters [BR:
pcom02000
]
Other transporters
Pores ion channels [TC:
1
]
NTU39_08090
Antimicrobial resistance genes [BR:
pcom01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
NTU39_08090
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
NTU39_08090
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
NTU39_08090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
UVA80948
UniProt:
A0A5E4XP66
LinkDB
All DBs
Position
1684301..1685779
Genome browser
AA seq
492 aa
AA seq
DB search
MTRMKSTTCHSFASLVSADLSGTSTVLRRTVLALASAAVLLTGCAGVHHDPLPAVPVPAQ
WAGASATSPAVAGNTATIAPDFWRAFGDPVLDRLITDVLAVNNDLAAAGIRVYRAQLQAG
LADTNLTPSVTVGGNATVQRTLDTHATGRKSTLSAQASYELDLWGKLAAQRDAARWEYEA
TDADRESARLSIIGTTAQLYWTIGFLNQQIANTEGNIAYSERILALVRSRYAAGAVSGLD
VAQTEGNLADQRAALTQLLQQRTENRNALAILFDRPPEQAAAEPSTLPTQALPVVPAGLP
AELLGRRPDLRAAELRLRGTLANVDITRTSFYPTFTLTGQVGTTSTSLERVLQNPIGSLG
VGLALPFIQWNTMQLQIKVSQTQYEEAVVNFRKSLFTALSEVENALSAREQLTREGEQRA
LSLVQAQRAETLLRSRYQAGAIGVQQWLEQLQLLRNAQTADAQVRLNRLNNRMVLYKALG
GAGNASDVNPPA
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgaccagaatgaaatctactacttgccactcgttcgcttcgttagtttcggccgatctg
tccggcacgtcgacggtgctgcgtcgtacggtcctcgcgctggcgagcgcagcagtgctg
ctcactggctgcgctggtgtacatcacgatccgctgccggcggtgccggtgcccgcgcag
tgggcgggggcttccgcgacgtcgcctgccgtcgctggcaacaccgcaacgattgccccc
gacttctggcgtgcgttcggcgacccggtgttggatcgtctgattaccgatgtgctggcc
gtcaacaacgacctggcggcggcggggattcgcgtgtatcgcgcgcaattgcaggcgggg
ttggcggatacgaacctcacgccgtccgtcaccgttggtgggaacgcgaccgtgcaacgc
acgctggatacccatgcaacggggcgtaagagcaccctgtcggcgcaggcatcgtacgag
ctggacctgtggggcaagctggccgcgcaacgcgatgcggcgcgctgggagtatgaggcg
accgacgccgaccgcgagtccgcgcgtctgtcgatcatcggtacgacggcgcagttgtac
tggacgatcggcttcctgaatcagcagatcgccaacaccgagggcaatatcgcttatagc
gaacggattctggcgctggtgcgctcgcgctatgcggcgggggcggtgtcggggctggat
gtggcgcagacggagggcaatctggccgatcagcgcgcggcgctcacgcagttgttgcag
cagcgcacggaaaaccgcaatgcgctggcgattctgttcgaccgtccgccggagcaggcg
gcggccgaaccgtcgacgctgccgacgcaggcgttgcctgtcgtaccggcgggcttgcct
gcggagctgctgggccgtcgtccggacttgcgcgcggcggaattgcgtttgcgtgggacg
ctcgctaacgtcgacatcacccgcacgagcttttacccgacgttcacgctgacggggcag
gtagggacgacgagtacgtcgctggagcgcgtgttgcagaacccgatcggttcactgggg
gtggggctggcgttgccgttcatccagtggaatacgatgcagttgcagatcaaggtgtcg
cagacgcagtacgaggaagcggtggtgaatttccgcaagagcctctttacggcgctgagc
gaagtcgagaacgcactgtcggcgcgtgagcaactgacgcgggagggcgagcaacgtgcg
ctgtcgctggtgcaggcgcagcgtgccgagaccttgctgcgttcgcgctatcaggcgggc
gctatcggagtgcagcagtggctggagcagttgcagttgctgcgcaacgcgcaaacggcc
gatgcgcaagtgcgcctgaaccgtttgaacaatcgcatggtgctgtacaaggcgctgggc
ggggcagggaatgcgtcggatgtgaatccgcctgcttga
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