Pandoraea commovens: NTU39_24090
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Entry
NTU39_24090 CDS
T08365
Name
(GenBank) efflux transporter outer membrane subunit
KO
K18139
outer membrane protein, multidrug efflux system
Organism
pcom
Pandoraea commovens
Pathway
pcom01501
beta-Lactam resistance
pcom02024
Quorum sensing
Module
pcom_M00642
Multidrug resistance, efflux pump MexJK-OprM
Brite
KEGG Orthology (KO) [BR:
pcom00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
NTU39_24090
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
NTU39_24090
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcom02000
]
NTU39_24090
01504 Antimicrobial resistance genes [BR:
pcom01504
]
NTU39_24090
Transporters [BR:
pcom02000
]
Other transporters
Pores ion channels [TC:
1
]
NTU39_24090
Antimicrobial resistance genes [BR:
pcom01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
NTU39_24090
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
NTU39_24090
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
NTU39_24090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
YegS_C
Motif
Other DBs
NCBI-ProteinID:
UVA79056
LinkDB
All DBs
Position
5347597..5349093
Genome browser
AA seq
498 aa
AA seq
DB search
MTAALAAAVLSGCISMAPTYERPAAPVANVWTPDVSASPATATAQPASALDWREYFADPQ
LRSLIDTALANNRDLRVALARVEQARAVYGIQRADLFPSAGIGASGTRQRLPGDLSLTGN
PYISSQYQVGLGLSTWELDFWGRIRNLKDAALDDYLASDASRRALELSLISQVAQTWLSL
REFDERIALAQQTVDSRAESLRIFTRREQVGSTSKLDLTEVTTLWQQARALVTQLEQQRA
VQAHALQVLVGVPIDTSPQALDRTVDDANLMRDLEPGLPSSLLEDRPDIIAAEYQLRAAH
ANIGAARAAFFPQITLTGSVGTASSALDGLFKAGSAAWTFTPSINIPIFQGGRLVNNLDL
AEARRVESVANYEKTIQGAFRDVADALSARRWLAEQVTILQATQDAQAERARLAKLRYDH
GAAAFLEVLDAQRDLLAIEQTTVQTRRALLSARVSLYTALGGGSRLMPAADTPSGLFGQT
PRVIEPSPSTANTAPTVQ
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atgacggctgcgcttgccgctgccgtgctcagcggctgtatttcgatggcgcccacttac
gagcgccccgccgcccctgtcgccaatgtgtggacgccggacgtcagcgcctcacccgcc
acggcaacggctcagcccgcgtctgcgctcgactggcgcgagtacttcgccgatccgcag
ctacgcagcctcatcgacaccgccctcgcgaacaatcgcgatctgcgcgtcgcgctagcg
cgcgtggaacaagcgcgcgcggtgtacggcattcaacgcgccgatctatttccttccgca
ggcatcggcgcgagtggcacacggcaacgtctgcccggcgacctgagtctcaccggcaat
ccctacatcagcagccagtatcaggtcggcctcggcctgtcgacatgggagctggacttc
tggggccgcatccgcaatctgaaagacgcagcgctcgacgactatctcgcgtccgacgcc
tcgcgtcgcgcgctcgaactcagcctgatctcgcaagttgcgcagacgtggctgagtctg
cgcgaattcgacgaacgcatcgcgcttgcgcagcaaacggtcgacagccgagccgagtcg
ctgcgcatcttcacgcgacgcgagcaagtcggctcgacgtcgaagctcgacctcacggaa
gtcaccacgctctggcaacaagcgcgggcactcgtcacgcaactcgaacagcaacgcgcg
gtgcaggcgcacgcgttgcaagtgcttgtcggcgtgcccatcgacacgtcgccgcaagcg
ctcgatcgcacggtcgacgatgccaatctgatgcgcgacctcgagcccggcttaccgtcg
tcgttgctggaggatcgtccggacatcatcgcggccgagtatcaactgcgcgcagcgcat
gccaacatcggcgcagcccgcgccgcgttcttcccgcagatcacgctgacgggctccgtc
ggcacggcaagcagcgcactcgacggcctgttcaaagctggcagcgccgcgtggaccttc
acgccgagcatcaacattccgatcttccagggcggacgtctcgtcaacaatctcgatctg
gccgaagcgcgtcgcgtggagtcggtggcgaattacgagaagacgattcagggcgcattt
cgcgacgtcgccgatgcgttgagcgcacgccgctggctcgccgagcaggtgacgatcctg
caagcgacgcaggacgcgcaggcggaacgcgcgcgtctcgccaagctgcgttacgaccac
ggcgccgcggccttcctcgaagtcctcgacgcccaacgcgatctactcgccatcgaacaa
accacagtgcagacgagacgcgcgctgctctccgcacgcgtctcgctctacacggcgctc
ggcggtggcagccgactcatgcctgcggccgacacaccctcgggactgttcggacaaacg
ccccgcgtcatcgagccatcgccgagcacggcgaacaccgcgccgaccgtccaataa
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