Phocaeicola coprophilus: I6J50_00305
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Entry
I6J50_00305 CDS
T07209
Name
(GenBank) efflux transporter outer membrane subunit
KO
K18139
outer membrane protein, multidrug efflux system
Organism
pcop
Phocaeicola coprophilus
Pathway
pcop01501
beta-Lactam resistance
pcop02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pcop00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
I6J50_00305
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
I6J50_00305
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcop02000
]
I6J50_00305
01504 Antimicrobial resistance genes [BR:
pcop01504
]
I6J50_00305
Transporters [BR:
pcop02000
]
Other transporters
Pores ion channels [TC:
1
]
I6J50_00305
Antimicrobial resistance genes [BR:
pcop01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
I6J50_00305
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
I6J50_00305
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
I6J50_00305
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
DUF6468
REST_helical
Motif
Other DBs
NCBI-ProteinID:
QRO24800
LinkDB
All DBs
Position
72129..73511
Genome browser
AA seq
460 aa
AA seq
DB search
MKKQIIGMMCLAAMMSSCHIYKSYDRPETIDASGIYRDPASATDTLAADTTNMGNLPWKD
IFRDAKLQALIEEGLANNVDMQAAALRVQEAKVMLTSAKLSYLPSINLVPQGTATSMDGG
TYVKAYQLPVAASWELDFFGKILNTKRGQKVAYEQSKYSEQAVRSQIICGIANIYYSLLM
LDRQVEITTETAAIYKENVRVMEAMKIAGMTTEAAVAQMRAASHQVEASLMELKRQVRET
ENSLSVLLAKAPQTIDRNTLDEQVMPEELAAGVPMQLLENRPDVKIAEMTLASAYYTTNS
ARAAFYPGLNITATAGWTNGSGISVANPGQFMLQALASLAQPIFNHGKLIANLKVSKAEE
KIARMNYQQTILEAGKEVSDALYLFDTQNKKLIEDRGQVEQLDKAVTYTKALFQSGDATY
LEILTAQQNLLSAQLSEVSDNFQRMQAVINLYSALGGGRE
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaacagataataggaatgatgtgtctggctgctatgatgagcagttgccacatt
tacaaatcatacgatcgtccggaaacgatagatgcttcaggcatctatcgtgatccggca
tcagcaacggacacgctggctgctgatacgaccaatatgggaaatctgccatggaaggat
attttccgcgatgccaagttgcaagctttgatcgaagaagggctggcaaataatgtggac
atgcaggcagcagctcttcgtgtacaggaagcaaaggtaatgttgacatctgcaaagttg
tcttatttaccttccatcaacctggttcctcagggaacagctaccagcatggatggaggc
acttatgtaaaggcttatcagttgccggttgcagcaagctgggaacttgacttcttcgga
aagattctgaataccaaacgtggccagaaagtagcatacgaacaaagcaagtattcagag
caggccgtacgctctcagattatttgtggcattgccaatatatattactctttgctgatg
cttgaccgtcaggtagagattacgactgaaacagctgctatctataaggaaaatgtccgt
gtcatggaagctatgaaaatagccggtatgacaactgaagctgccgttgcccagatgcgt
gctgccagtcatcaggtagaagcttcgctgatggagttgaaacgtcaggttcgtgagact
gagaactctctgtctgttctgctggcaaaagctccgcagacgattgaccgcaatacgctg
gatgaacaggtgatgccggaagaactggctgccggtgttccgatgcagttgcttgaaaac
cgtccggatgtgaagattgcagaaatgactctggcttcggcttattatacaacgaactca
gcacgtgctgctttctatccgggactgaacattacggctactgccggctggacaaacggt
tctggtatttctgtggcaaatcccggacagttcatgctgcaggcactggcttctctggct
cagccgattttcaatcacggcaagctgattgctaatttgaaggtatccaaggcagaagaa
aagattgcccggatgaattaccagcagactattctggaagcaggtaaggaagtgagcgat
gctttgtatctgtttgatacgcagaataagaaactgatcgaagatcgtggacaggttgaa
cagctggataaggcagttacttatacgaaagctttgttccagagtggagatgcaacttat
ctggaaattctgaccgcccagcagaatctgttgagcgcccagttgagtgaagtttctgat
aatttccagcgcatgcaggctgttatcaatctgtacagcgcattgggaggcggtagagaa
taa
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