Pseudomonas chlororaphis subsp. aurantiaca: JM49_10520
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Entry
JM49_10520 CDS
T03338
Name
(GenBank) RND transporter
KO
K18139
outer membrane protein, multidrug efflux system
Organism
pcp
Pseudomonas chlororaphis subsp. aurantiaca
Pathway
pcp01501
beta-Lactam resistance
pcp02024
Quorum sensing
Module
pcp_M00642
Multidrug resistance, efflux pump MexJK-OprM
Brite
KEGG Orthology (KO) [BR:
pcp00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
JM49_10520
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
JM49_10520
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcp02000
]
JM49_10520
01504 Antimicrobial resistance genes [BR:
pcp01504
]
JM49_10520
Transporters [BR:
pcp02000
]
Other transporters
Pores ion channels [TC:
1
]
JM49_10520
Antimicrobial resistance genes [BR:
pcp01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
JM49_10520
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
JM49_10520
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
JM49_10520
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
DAHP_synth_2
Motif
Other DBs
NCBI-ProteinID:
AIS12100
LinkDB
All DBs
Position
complement(2278178..2279596)
Genome browser
AA seq
472 aa
AA seq
DB search
MKAPLSLIAASLLLAACSSPAPRPDSGLQAPPAWHSPHTAAAQQDNRQWWTRFGSPELER
LIEQARLGSHDLAAAMARVRQAQATAVVAGAPLLPELKGALNANRQKLLRGNGYSQLDAD
SSNKAVDYFDASLSASYEIDFWGGKRATRDSALLGVQASEFDQATVELTLLSGVANSYAQ
VLSLREQSRIAELNLANAQSVLRLVQTRYDSGSATALELAQQKSLVAAQQRQLPLVQQQA
EDAQITLAALLGQPVQNLDLGQQPFAQLTWPGIDAGVPSDLLRRRPDIASAEARLAAAQA
DVTVARAAMLPSITLSASLGSGADTASDILRSPFYNLTSALAAPIFNAGRLSAERDRARA
RQQELLESYRGAIVNGFADVEKALASIRGLDQQRQWQSEELRQAQIAFDIAQSRYQAGAA
DLLTVLETQRTLYAAQDQNVQLRLSRLQASIALYKALGGGWKAEHADAAPPL
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcgcccctcagccttatcgccgccagcctgttgctggcggcctgcagcagcccc
gcgccgcgcccggacagtggcttgcaggccccgcccgcctggcactcgccccataccgcg
gccgcgcagcaagacaaccggcaatggtggacccgcttcggcagcccggaactggagcgc
ctgatcgaacaggctcgcctgggcagccacgacctggccgccgccatggcccgggtgcgc
caggcgcaggccacggcggtggtcgccggcgcgccgttgctgccggaactcaagggcgcg
ctcaacgccaaccggcagaagctgctgcgcggcaacggctacagccaactggacgccgac
agcagcaacaaggccgtggactacttcgacgccagcctcagcgccagctatgaaatcgac
ttctggggcggcaagcgcgcaacccgcgacagcgcgctgctgggcgtgcaggccagcgaa
ttcgaccaggccaccgtggagctgactctgctcagcggcgtggccaacagttacgcccag
gtgctgtcgctgcgcgagcagagccgcatcgccgaactcaacctggccaatgcgcagagc
gtgctcaggctggtgcagacccgctacgattcgggctcggccaccgccctggaactggcc
cagcaaaagagcctggtggccgcccagcagcgccagttgcccttggtgcagcaacaggcc
gaggacgcgcaaatcaccctcgccgccctgcttggccagccggtgcagaacctcgatctc
ggccagcagcctttcgcccaactgacctggccaggcatcgacgccggcgtgcccagcgac
ctgttgcgccgccgcccggacatcgccagcgccgaagccaggctcgccgcagcccaggcc
gacgtcacggtggcgcgggcggcaatgctgcccagcatcaccctgagcgccagcctcggt
tcgggcgccgataccgcctcggatatcctgcgcagcccgttctataacctgaccagcgcc
ttggcggcgccgatcttcaacgccgggcgcctgagcgccgagcgtgaccgggcccgggcg
cgccagcaagagctgctggaaagctatcgcggggcgatcgtcaacggcttcgccgatgtg
gaaaaggccctcgccagcatccgcggcctcgatcagcagcggcaatggcagagcgaagaa
ctgcgccaggcgcagatcgccttcgacatcgcccagagccgctaccaggccggcgccgcc
gacctgctcacggtcctggaaacccagcgcaccctgtacgccgcccaggaccagaacgtg
caactgcggctgtcgcgcctgcaggccagcatcgccctgtacaaggccttggggggcggc
tggaaagcggaacacgcagacgctgcgccgcccctgtag
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