Pseudomonas chlororaphis subsp. aurantiaca: JM49_10945
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Entry
JM49_10945 CDS
T03338
Name
(GenBank) channel protein TolC
KO
K12340
outer membrane protein
Organism
pcp
Pseudomonas chlororaphis subsp. aurantiaca
Pathway
pcp01501
beta-Lactam resistance
pcp01503
Cationic antimicrobial peptide (CAMP) resistance
pcp02020
Two-component system
pcp03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
pcp00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
JM49_10945
09132 Signal transduction
02020 Two-component system
JM49_10945
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
JM49_10945
01503 Cationic antimicrobial peptide (CAMP) resistance
JM49_10945
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcp02000
]
JM49_10945
02044 Secretion system [BR:
pcp02044
]
JM49_10945
01504 Antimicrobial resistance genes [BR:
pcp01504
]
JM49_10945
Transporters [BR:
pcp02000
]
Other transporters
Pores ion channels [TC:
1
]
JM49_10945
Secretion system [BR:
pcp02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
JM49_10945
RTX toxin transporter
JM49_10945
Multiple protein transporter
JM49_10945
RaxAB-RaxC type I secretion system protein
JM49_10945
Antimicrobial resistance genes [BR:
pcp01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
JM49_10945
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
JM49_10945
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
AIS12181
LinkDB
All DBs
Position
2373712..2375124
Genome browser
AA seq
470 aa
AA seq
DB search
MTHSPRFFSPLLILALVTIPAFADPGAQRAELLQVYRQAVEHDAQLSAARHEYQAQRESI
PQARAGLLPTLNAGSTMESVRLERDEPGLTRTRSTTVFQANLNQPLFRADRWFQLEAAHA
STAQAELELGAKEQGLVLTTAQAYFETLRALDLLAASKAEEAALKRQQQQAQARLENGAS
SITDVLDAQAAHDNAGANRKLAERKVDDAFEALSRLTRQDYSTIEGIQHQLPVELPVSND
ANEWVSRAVRQNLALQASSYAVIAAEQTNRQRKAGYAPTVDAVASWRKGENDSFGYSNPT
DFGRDGYRGNVTQSSIGLELNIPLYSGGMTRSQVREATERLAQSEDEREDRRREVVQNTR
NFYRAVNSDIEQVIARRQTIRSGQASVKANQVGRDLGSRNTADVLNAQRQLYSAVREYNN
ARYDYIIDTLKLKQAAGTLSPKDLSDLAMYLTKDYDADRDFLPPQERKAL
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgactcactccccccgttttttctcgccattgctcatcctggcactggtgacgatcccg
gctttcgccgatccaggtgctcagcgcgccgagctgctgcaggtttaccgccaggccgtc
gagcatgacgcccagctgtccgcggcgcgccacgagtaccaggcccaacgcgaaagcatc
ccccaggcccgggccgggttactgcccacactcaatgccggcagcaccatggaatcggtg
cgtctggaacgggatgagccgggcctgacccgcacccgcagcaccacggtgttccaggcc
aatctcaaccagccgctgtttcgtgccgatcgctggtttcaactggaagccgcccatgcc
agcaccgcccaggccgaacttgaattgggcgcgaaggagcagggcttggtgctgaccacg
gcccaggcctatttcgaaaccttgcgcgccctggacctgctcgccgcctccaaggccgag
gaagcggcgctcaagcgtcagcagcaacaggcccaggcccgcctggagaatggcgcctcg
agcatcaccgatgtgctcgacgcccaggccgcccatgacaatgccggcgccaatcgcaaa
ctcgccgagcgcaaggtcgacgatgccttcgaggccttgtcccgcttgacccgccaggac
tattcgacgatcgagggtattcagcatcagctgccggtggagctgccggtgtccaacgat
gccaacgaatgggtcagccgtgcggtgcgccagaacctggcgttgcaggccagcagctac
gcggtgattgccgccgaacagaccaaccgccagcgcaaggccggttatgcgccgaccgtc
gatgcggtggcgtcctggcgcaaaggtgaaaacgacagcttcggctacagcaaccccacc
gacttcggacgggatggctatcgaggcaatgtcacgcaaagcagcatcggcctggagttg
aatattccgctgtactccggcggcatgacccgttcccaggtgcgcgaagcgaccgagcgg
ctggcccagagtgaagacgagcgcgaggaccgccgtcgcgaagtggtgcagaacacgcgc
aatttctaccgcgcggtgaattccgatatcgagcaggtcattgcccgccggcagacgatt
cgttccggccaggcttcggtcaaggccaaccaggtcgggcgcgacctgggctcgcgcaac
accgcggatgtgctcaatgcccagcgccagctgtacagcgcggtgcgtgagtacaacaac
gcgcgctacgactacatcatcgacaccctcaagctcaagcaggcggcgggaaccctgagc
ccgaaagacctgagcgacctggcgatgtacctgaccaaagactacgacgccgatcgggat
ttcctgccaccgcaggagcgcaaggcgctctga
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