Pseudomonas chlororaphis subsp. aurantiaca: JM49_15205
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Entry
JM49_15205 CDS
T03338
Name
(GenBank) channel protein TolC
KO
K12340
outer membrane protein
Organism
pcp
Pseudomonas chlororaphis subsp. aurantiaca
Pathway
pcp01501
beta-Lactam resistance
pcp01503
Cationic antimicrobial peptide (CAMP) resistance
pcp02020
Two-component system
pcp03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
pcp00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
JM49_15205
09132 Signal transduction
02020 Two-component system
JM49_15205
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
JM49_15205
01503 Cationic antimicrobial peptide (CAMP) resistance
JM49_15205
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcp02000
]
JM49_15205
02044 Secretion system [BR:
pcp02044
]
JM49_15205
01504 Antimicrobial resistance genes [BR:
pcp01504
]
JM49_15205
Transporters [BR:
pcp02000
]
Other transporters
Pores ion channels [TC:
1
]
JM49_15205
Secretion system [BR:
pcp02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
JM49_15205
RTX toxin transporter
JM49_15205
Multiple protein transporter
JM49_15205
RaxAB-RaxC type I secretion system protein
JM49_15205
Antimicrobial resistance genes [BR:
pcp01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
JM49_15205
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
JM49_15205
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
AIS12958
LinkDB
All DBs
Position
complement(3323637..3325082)
Genome browser
AA seq
481 aa
AA seq
DB search
MLRKLSLAIAVSCASTGTSWAVDTPTTVKTDLVSVYQEAVDNNADLAAARANYGARREVV
PQARAGLLPNLSAGAEMMNTRTKLDDPSVTSNRSGNTWSATLAQPIFRADRWFQLQAAEA
VNEQAALELSATEQNLILQTAENYFAVLRAQDNLASTKAEEAAFKRQLDQSNERFDVGLS
DKTDVLQSQAGYDTARANRIIAERRVQDAFEALITLTNRQYNSIQGVVHSLPVHVPTPND
AKAWVETAGRQNLNLQATNHAVAAAEETVRQRKAGHAPTLDAVAKYQKGDNDNLGFTNPS
RNGVRYGGDVEQTSIGLQLNIPIYSGGLTSSQVREAYSRLTQSEQQRESLRRQVVENTRN
LHRAVNTDVEQVQARKQSIISNQSAVEATEIGYQVGTRNIVDVLDAQRQLYNSVRDYNNS
RYDYILDNLRLKQAAGTLSPQDLQDLGRYLKADYNPDKDFLPPDLAAAAKKNFERGPTST
Q
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgcaaactctcactggcgattgccgtgtcttgtgcgtccaccggaacgtcgtgg
gcagtggacacgcccacgacggtgaagaccgacctggtcagcgtctaccaggaggcggtc
gacaataacgccgacctggccgccgctcgcgccaactacggtgcccgccgcgaagtggtg
ccccaggctcgtgccgggctgctgccgaatctctcggccggtgccgagatgatgaacacc
cgcaccaagctcgacgacccgtcggtgacctccaaccgcagcggcaatacgtggagcgcc
accctggcccagccgatcttccgcgccgaccgctggttccagttgcaggccgccgaagcg
gtcaacgagcaggccgcgctggagctgtcggccaccgagcagaatctgatcctgcagacg
gccgagaactacttcgcggtgctgcgcgcccaggacaacctggcctcgaccaaggccgag
gaagccgccttcaagcgtcagctggaccagtccaatgagcgtttcgacgtcggcctgtcg
gacaagaccgacgtcctgcaatcccaggccggctacgacacggcgcgggccaaccggatc
atcgccgagcgccgggtgcaggatgccttcgaagccctgatcaccctgaccaaccgccag
tacaactcgatccagggcgtggtccacagcctgccggtgcacgtgccgacccccaacgat
gccaaggcctgggtcgagaccgccgggcggcagaacctcaacctgcaggccaccaaccat
gccgtggccgcagccgaagagaccgtgcgccaacgcaaggccggccatgcgccgaccctg
gacgcggtggccaagtaccagaaaggcgacaacgacaacctcggcttcaccaacccttcg
cggaacggcgtgcgctatggcggcgatgtcgagcagaccagcattggcctgcagttgaat
atcccgatctacagcggcggcctgaccagctcccaggtgcgcgaggcctattcgcgcctg
acccagagcgaacagcagcgcgagagcctgcgtcgccaggtggtggagaacacccgcaac
ctgcaccgcgcggtgaataccgacgtcgagcaggtgcaggcgcgcaagcagtcgatcatc
tccaaccagagtgcggtggaagccaccgagatcggttaccaggtcggtacccgcaatatc
gtcgacgtgttggatgcccagcgccagctgtacaactcggtacgcgactacaacaacagc
cgctacgactacatcctcgacaacttgcgcctcaagcaggccgccggcaccctcagcccg
caggacctgcaggacctggggcggtacctgaaggccgactacaacccggacaaggatttc
ctgccaccggacctggccgcggcggcgaaaaagaatttcgagcgcggcccaaccagtacc
cagtaa
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