Pseudomonas chlororaphis subsp. aurantiaca: JM49_18315
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Entry
JM49_18315 CDS
T03338
Name
(GenBank) RND transporter
KO
K18139
outer membrane protein, multidrug efflux system
Organism
pcp
Pseudomonas chlororaphis subsp. aurantiaca
Pathway
pcp01501
beta-Lactam resistance
pcp02024
Quorum sensing
Module
pcp_M00642
Multidrug resistance, efflux pump MexJK-OprM
Brite
KEGG Orthology (KO) [BR:
pcp00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
JM49_18315
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
JM49_18315
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcp02000
]
JM49_18315
01504 Antimicrobial resistance genes [BR:
pcp01504
]
JM49_18315
Transporters [BR:
pcp02000
]
Other transporters
Pores ion channels [TC:
1
]
JM49_18315
Antimicrobial resistance genes [BR:
pcp01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
JM49_18315
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
JM49_18315
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
JM49_18315
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
HH_AprE
SIKE
Motif
Other DBs
NCBI-ProteinID:
AIS13534
LinkDB
All DBs
Position
4026593..4028011
Genome browser
AA seq
472 aa
AA seq
DB search
MRPRLEPLAVLLLLALQGCSLAPGYQVPTVDLPAHYREQTSDGPWHPAQPADQLASQWWL
LYQDPRLDDLQQRLLKANPDLAAALAHFDAAQAYASQLHAGLFPQISASGQSLRQRQSDH
RPLRGSSQPSVYNSNTAGFALSFDPDLWGRIRNQVAAGDAQAEASADDLAVARLSLQQQL
ASLYVQLNGLDAQRAILSQSLDDYAQALQLTRSRYQGQIASELDLTRAQSQLASAEAELD
EVRGQRNLTEHAIGELVGEPASQFQLPAATQALTLPGVPQQLPSALLQRRPDIAAAERRV
FAANANIGVARAAWYPDFNLTGLLGGQTQGSGNLLAAGNRYWALGPLVNLPIFDGGRLSA
NERQAHAEFEEAAAHYRSQVLRAVREVEDNLGQLRDLQQEALDQQAAVNAAEHTQTLAMN
SYQAGAVSYLEVVTAQTVALQAQRGLQALQTRRLQASVGLVVALGGGWKAGA
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgcgcccaaggcttgaaccgcttgctgtgttgctgttgctggccttgcaaggctgctcc
ctggcgcccggctaccaggtgccaaccgtggacctgccggcccactaccgcgaacagacc
agcgacgggccctggcatccggcacaaccggcggatcaactggccagccagtggtggctg
ctgtaccaggacccgcgcctggatgacctgcaacaacgcctgctcaaggccaacccggac
ctggcggcggcgctggcacacttcgacgcggcccaggcctatgccagccagctgcatgcc
gggctgttcccgcagatcagcgccagcggccagtcgctgcgccaacggcagtcggaccac
cggccgttgcgcggcagcagccagccttcggtgtacaacagcaacaccgccggttttgcc
ctgagcttcgacccggacctgtgggggcggattcgcaaccaggtggccgccggcgatgcc
caggccgaagcctcggccgacgacctggcggtggcgcgcctgagcctgcaacagcagttg
gcgagcctctatgtgcagctcaatggcctggatgcgcagcgtgcgatcctcagccagtcc
ctggacgactacgcccaggcactgcaactgacccgcagccgctaccaggggcagatcgcc
tcggagctggacctgacccgcgcacaaagccagctggccagtgccgaggccgagctggac
gaagtgcgcgggcaacgcaacctcaccgaacacgcgatcggcgaactggtgggcgaaccg
gccagccagttccagctgcccgcggccactcaggcactgaccctgcccggcgtgccgcaa
cagctgcccagcgcccttctgcaacgccgcccggacatcgccgccgccgaacgccgggtg
ttcgccgccaacgccaacataggcgtcgcccgggccgcctggtacccggacttcaacctc
accggcctgctcggcgggcagacccagggcagcggcaacctgctggcggcgggcaatcgc
tactgggcgctggggcctttggtcaacctgccgatcttcgacggcggccgcctgagcgcc
aacgaacgccaggcccacgccgaattcgaagaagccgccgcccattaccgcagccaggtg
ctgcgggcagtacgcgaggtggaggacaacctggggcagttgcgggatttgcagcaggag
gcgctggaccagcaggcggcggtgaatgccgccgagcatacgcagactttggcgatgaac
agttatcaggcgggagcggtgagttatctggaggtggtgacggcgcagaccgtggcgttg
caggcgcagcgggggttgcaggcgttgcagactcggcggttgcaggcgagtgtggggttg
gtggtggcgttgggaggggggtggaaagctggcgcttga
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