Porphyromonas crevioricanis: NCTC12858_01801
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Entry
NCTC12858_01801 CDS
T05510
Symbol
abfD
Name
(GenBank) 4-hydroxybutyryl-CoA dehydratase/vinylacetyl-CoA-Delta-isomerase
KO
K14534
4-hydroxybutyryl-CoA dehydratase / vinylacetyl-CoA-Delta-isomerase [EC:
4.2.1.120
5.3.3.3
]
Organism
pcre
Porphyromonas crevioricanis
Pathway
pcre00650
Butanoate metabolism
pcre00720
Other carbon fixation pathways
pcre01100
Metabolic pathways
pcre01120
Microbial metabolism in diverse environments
pcre01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
pcre00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
NCTC12858_01801 (abfD)
09102 Energy metabolism
00720 Other carbon fixation pathways
NCTC12858_01801 (abfD)
Enzymes [BR:
pcre01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.120 4-hydroxybutanoyl-CoA dehydratase
NCTC12858_01801 (abfD)
5. Isomerases
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.3 vinylacetyl-CoA Delta-isomerase
NCTC12858_01801 (abfD)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HpaB_N
HpaB
Acyl-CoA_dh_M
Motif
Other DBs
NCBI-ProteinID:
SQH73922
UniProt:
A0A0A2FFU8
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All DBs
Position
1:2035997..2037457
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AA seq
486 aa
AA seq
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MMTSQEYIESMRKLNLKVYFMGERIENPVDHPMIRPSLNSVAMTYELAEKPEYQEVMTAI
SNLTGKRINRFCHLHQSTEDLKNKVKMQRLLGQKTASCFQRCVGMDAFNAIYSTTYEMDQ
ELGTSYHARFVEYLKYVQDNDLVVDGAMTDPKGDRGLSPSQQEDPDMYLHIVEVREDGIV
VRGAKAHQTGAVNSHEHLIMPTVAMKEGDKDYAVSFAVPGDTEGLFMIYGRQSCDTRKTE
AGAEIDLGNPTFGGHEALVVFDNVFVPNERVFMCKEYQYAGMMVERFAGYHRQSYGGCKV
GVGDVLIGAAALAAEYNGVPKVSHIKDKLIEMIHLNETLYACGIACSSEGKPTASGNYLI
DLLLANVCKQNVTRLPYEIARLAEDIAGGLMVTMPSEQDLRDPELGPVVKKYLKGAVGKD
TTNRMRILRLIENMTLGTAAVGYRTESMHGAGSPQAQRIMISRQGNLEAKKQMAREIARI
DTSLDK
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgatgacaagtcaagagtacattgagagcatgcgcaaactcaacctgaaggtgtatttc
atgggagagcgcattgagaaccctgttgatcaccccatgattcgtccttcactcaactct
gtggccatgacctatgagttggctgagaagcctgaatatcaagaggtgatgaccgccatt
tccaatcttactggcaagcgtatcaatcgcttttgtcacttgcatcagtctaccgaagac
ctcaagaataaggtaaagatgcagcgtctgctcggtcagaagactgcttcttgcttccaa
cgctgcgtagggatggatgctttcaatgcaatctactctactacatatgaaatggatcag
gagcttggaacaagctaccacgctcgtttcgtagaatatctcaaatatgttcaggacaac
gacctcgtagtagacggggcaatgactgaccccaaaggggaccgtggcctatctccttct
caacaggaagacccggatatgtatctgcatatcgtggaagtgcgcgaagacggtattgtc
gtacgtggagccaaggctcaccagactggagctgtcaattctcatgagcacttgatcatg
cctactgttgccatgaaagaaggtgacaaggattatgctgtttcatttgccgttcccggt
gacacggaaggtctgtttatgatctatggtcgccagagctgtgacactcgtaagacagaa
gccggagccgaaatagatctcggtaaccccacattcggaggacacgaagctttggtagta
ttcgacaatgtgtttgtacccaacgaacgcgtcttcatgtgtaaggaataccaatatgca
ggtatgatggtagaacgatttgccggctatcatcgtcaaagctacggaggctgcaaagtg
ggtgtgggagatgtgctcattggagctgctgctttggccgccgaatacaacggtgtgcct
aaagtatctcacatcaaggacaagttgatagagatgatacatctgaatgaaacactctac
gcttgcggtattgcttgttcttccgaaggtaaacctactgcatccggtaactatctgatc
gacttgcttctggcgaatgtttgtaagcagaatgttacacgtctgccatatgagattgcc
cgcctggccgaagatatcgctggaggtctgatggtaaccatgccatctgagcaagacctg
cgtgatccggagcttggcccagtggtgaaaaagtatctcaagggagctgtaggaaaagat
acaaccaatagaatgcgtatcctgcgactgatcgagaatatgacattgggtactgcagct
gtcggctaccgtacggagtctatgcacggagccggttctcctcaagcccaacgcatcatg
atttctcgtcaaggcaacttggaagccaagaaacaaatggcaagagagattgctcgtatt
gatacctctttggataagtaa
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