Candidatus Protochlamydia amoebophila: PC_RS03040
Help
Entry
PC_RS03040 CDS
T00172
Name
(GenBank) unnamed protein product
KO
K12340
outer membrane protein
Organism
pcu
Candidatus Protochlamydia amoebophila
Pathway
pcu01501
beta-Lactam resistance
pcu01503
Cationic antimicrobial peptide (CAMP) resistance
pcu02020
Two-component system
pcu03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
pcu00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
PC_RS03040
09132 Signal transduction
02020 Two-component system
PC_RS03040
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
PC_RS03040
01503 Cationic antimicrobial peptide (CAMP) resistance
PC_RS03040
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcu02000
]
PC_RS03040
02044 Secretion system [BR:
pcu02044
]
PC_RS03040
01504 Antimicrobial resistance genes [BR:
pcu01504
]
PC_RS03040
Transporters [BR:
pcu02000
]
Other transporters
Pores ion channels [TC:
1
]
PC_RS03040
Secretion system [BR:
pcu02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
PC_RS03040
RTX toxin transporter
PC_RS03040
Multiple protein transporter
PC_RS03040
RaxAB-RaxC type I secretion system protein
PC_RS03040
Antimicrobial resistance genes [BR:
pcu01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
PC_RS03040
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
PC_RS03040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
CdiI_3
Motif
Other DBs
NCBI-ProteinID:
CAF23359
UniProt:
Q6MDJ0
LinkDB
All DBs
Position
complement(799350..800618)
Genome browser
AA seq
422 aa
AA seq
DB search
MHVYFLFFSVLVTLLSPLSLVAKLTLEECQTIALENGEKKTIADLQALIAYDRIDEARST
GRPKLNIHGDYMTSGETKHWRHNTRNRHVKVSLVIPICNFGLTKEAVKSQKNLYQSSLHS
LDQIKQDILHAVSEAYFELLIFQKLEWIVEESIRSLHRQIEVTQDFLNQGLIHRNEALLF
EVQLAQFQQNSMEAKLNTKLATERLNRLMNKNLDNLIEIEDILTFTNQEICLDNLIEAAK
LNHPQLLALSAQIQAVKHGYRSEKATLYPNLYAFSNYSNTSDYTLPYRQGLDAGIAIDLS
LYDGGYTYAKLRRIKKELSQLEWRYQELERDIELNIRSSFLAIQTALGKIPVAQTGVTLA
EENLAITQNLFEEGLVTNLDVVHDHENLLEARVSYFKTLYTYHKSRANLIHSAGMMHKKG
YL
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atgcatgtctattttttatttttttcagtgctagtaactttgttatctcccctgtctctt
gtagctaaacttactttggaagaatgtcaaacaatcgctcttgagaacggagaaaaaaaa
acaattgcagatcttcaagctttaattgcttatgatcgaattgatgaagcacgaagcacc
ggtcgtcctaagttaaatattcatggcgattatatgacctctggagaaactaaacactgg
cgacataatacacgaaatagacatgtcaaagtttctcttgtgattccaatttgtaatttt
gggttaactaaagaggctgttaaatctcagaaaaatctttatcagtcttctcttcattct
ttagaccaaatcaagcaagacattctgcatgcagttagtgaggcttattttgaattatta
atttttcaaaagcttgaatggattgttgaagagtctattcgatcattgcataggcaaatc
gaagtaacccaagattttctaaatcaaggattaatacatagaaatgaagctttattattc
gaagttcaattggcacaatttcaacaaaattccatggaagctaaacttaacacgaaatta
gcgactgaaaggcttaatcgactgatgaataaaaatttagataatttaattgaaattgaa
gatattttgacttttacaaatcaggaaatttgcctagacaatttaatcgaagcggctaaa
cttaaccatcctcaacttttagccttatccgcacaaatccaagcagttaaacatgggtat
cgttctgaaaaagcaaccttatatccaaatttgtatgctttttccaattacagtaatacc
tctgattatacgcttccttatcgtcaaggattagatgcaggaattgctattgatctatct
ttgtacgatggaggttatacctacgccaaactccgcagaataaaaaaagaattaagtcaa
ttagagtggcgttatcaagaacttgaaagagatatcgagttaaatatccgctcctctttt
ttagccattcaaaccgccctcggaaaaatccccgttgctcaaacaggagttactttagca
gaagaaaatctcgcaatcactcaaaatttattcgaagagggattggtgactaatcttgac
gtggtacatgatcatgaaaatttattagaagcacgagtaagctattttaaaacgctttat
acatatcacaaatcaagggctaatttgatccattcagcaggaatgatgcataaaaaagga
tatctctaa
DBGET
integrated database retrieval system
