Pseudomonas cucumis: PSH97_13180
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Entry
PSH97_13180 CDS
T09632
Name
(GenBank) efflux transporter outer membrane subunit
KO
K18139
outer membrane protein, multidrug efflux system
Organism
pcuc
Pseudomonas cucumis
Pathway
pcuc01501
beta-Lactam resistance
pcuc02024
Quorum sensing
Module
pcuc_M00642
Multidrug resistance, efflux pump MexJK-OprM
Brite
KEGG Orthology (KO) [BR:
pcuc00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PSH97_13180
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
PSH97_13180
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcuc02000
]
PSH97_13180
01504 Antimicrobial resistance genes [BR:
pcuc01504
]
PSH97_13180
Transporters [BR:
pcuc02000
]
Other transporters
Pores ion channels [TC:
1
]
PSH97_13180
Antimicrobial resistance genes [BR:
pcuc01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
PSH97_13180
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
PSH97_13180
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
PSH97_13180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Exonuc_VII_S
Motif
Other DBs
NCBI-ProteinID:
WLG87415
LinkDB
All DBs
Position
2876516..2877997
Genome browser
AA seq
493 aa
AA seq
DB search
MTDRSLINLVASLITARGSRLLSLSLCVAMLSACAIGPDYQRPQAAAPAQYKEAAGWRQA
NPSDSLARGAWWELYGDQQLNGLIEKLNSANQTVAQSEAQYRQAQALVRSARGAFFPTVD
LTVGKTRSSQGTGSSSSSLSSSSSGIRDTYTAQAGVSWEADVWGKLRRGLEADTANAEAS
FADLAAMRLSQQSELVQNYLQLRVIDEQKRLLEATVEAYQRSLTMTENQYRAGVSGKDAV
AQATTQLKSTQAEMVDLIWQRAQFENAIAVLIGLPPAEFSLAETKDIPALPQVPLSLPSQ
LLERRPDIASAERSVMAANANIGVAKAAYYPDLTLSLNGGYSSSTSNNWISVPNRFWSVG
PQLAMTLFDGGQRSAEVDRSEAAYDETVAKYRQTVLDGFREVENYLVQLKVLEDEAKVRQ
EALDAARESLRLTQNQYKAGVIAYLDVVVVQATALSNERNVLSLLQSRLIASVQLIAALG
GGWDGQLQVSDKQ
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgactgaccgttcgcttatcaatctggttgcatcgctgatcacagcccgaggctcgcgt
ttgctgagcctgtcgctgtgcgtggcgatgctcagtgcctgcgccatcggcccggattac
cagcgcccgcaagccgccgcgccggcacagtacaaagaggccgccggatggcgccaggcc
aaccccagcgactctctggcgcgcggtgcctggtgggagctgtatggcgatcagcagctc
aatggtttgatcgaaaaactcaacagcgccaaccagaccgtcgcccagtccgaagcgcag
taccgccaggcccaggccttggtacgcagtgcccggggtgcgtttttcccgaccgtggac
ctgacggtcgggaaaacccgctccagccaaggcaccggtagcagcagttcgagcctgagc
agttcttccagtggtattcgcgacacctatacggcgcaggccggagtcagttgggaagca
gacgtctggggcaaattgcgccgaggcctggaggccgacacggccaacgccgaggcgagt
tttgctgacttggcggcgatgcgcttgagccagcaatcggagctggtgcagaactacctg
caactgcgggtgatcgacgaacagaaacgcctgctggaagcgacggtcgaggcctatcag
cgttcgctgaccatgaccgaaaaccagtaccgcgccggtgtctccggcaaggacgcagtg
gcccaggccactactcagctcaaaagcacccaggcggaaatggtcgacctgatctggcag
cgcgcgcagttcgagaacgccatcgccgtactgattggtctgccgccggccgagttcagc
ctggctgaaaccaaagacatcccggcattgccgcaggtgccgctgagcctgccttcgcag
ttgctggagcgccgcccggacatcgcttccgccgagcgctctgtaatggccgccaatgcc
aacatcggcgtggccaaagccgcctactacccggacctgaccctgagcctgaacggcggt
tatagcagcagcacctcaaacaattggatcagcgtgccgaaccgtttctggtcggtaggc
ccgcaactggccatgaccctgttcgacggtgggcagcgctcggcggaagtcgatcgcagc
gaagcggcctacgacgagaccgtcgccaagtaccgccagaccgtgctcgacggcttccgt
gaagtggaaaactatctggtgcagctcaaggtgctggaagacgaagccaaggtgcgccag
gaagccctggatgcggcacgcgagtccctgcgcttgacccagaatcagtacaaggccggg
gtgattgcttatctggatgtggtggtggttcaggctacggcgttgagcaacgagcgcaac
gtgctgagtttgctgcagagccgcttgatcgccagcgtgcagttgattgccgcgctgggc
ggcgggtgggacgggcagcttcaggtgagcgacaagcaatag
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