Pseudomonas chlororaphis PCL1606: PCL1606_23260
Help
Entry
PCL1606_23260 CDS
T03768
Name
(GenBank) multidrug RND transporter
KO
K18139
outer membrane protein, multidrug efflux system
Organism
pcz
Pseudomonas chlororaphis PCL1606
Pathway
pcz01501
beta-Lactam resistance
pcz02024
Quorum sensing
Module
pcz_M00642
Multidrug resistance, efflux pump MexJK-OprM
Brite
KEGG Orthology (KO) [BR:
pcz00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PCL1606_23260
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
PCL1606_23260
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcz02000
]
PCL1606_23260
01504 Antimicrobial resistance genes [BR:
pcz01504
]
PCL1606_23260
Transporters [BR:
pcz02000
]
Other transporters
Pores ion channels [TC:
1
]
PCL1606_23260
Antimicrobial resistance genes [BR:
pcz01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
PCL1606_23260
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
PCL1606_23260
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
PCL1606_23260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
AKA23779
UniProt:
A0A0D5XYI6
LinkDB
All DBs
Position
2461683..2463152
Genome browser
AA seq
489 aa
AA seq
DB search
MSSKTLRTRLSLVLLAMSLAGCANYSGLKTEGVSLEAKSLKAGQSLNGVTLSPAAWPKSD
WWTSLGDPQLDGLIREALHDSPDMQIASARAHQASAAAYAADAARMPTLDASGSVSRSRL
ARDQDPRGQGGAYSTLRSLSMNFNYTFDLWGGQRDTWEAALGQARAAEIDRQAAQLTLAA
DVARAYSDLGQAHIVHDLAAEDLKRTRQMLELSQKRLSSGIDSQYQYQQTESLEASSEAS
LIDAEKRLQSAKIALAVLLGKGPDRGNEIARPKVLQASAVALPSVLPAELLGRRPDLVAA
RWRVEAASKSIDAGKTNFYPNLNLGAVAGTQALLGDAMFGSASRFFNIAPTVSLPIFDGG
RLRADLDARDADYDLAVAQYNKSLVNALGDVSDTLSQLRDIGRQIAAQQHATDIAQDSYD
TVVQRYGSGIGNYLDVLSIEQQLLQAQRQLATLNAEQIDLSIQLMQALGGGFQVDNLAAA
TPTPASRNQ
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgagcagtaaaaccttgcgtacccgtttgagcctggtgctgctggccatgagcctggcc
ggttgtgccaattacagcggcctgaagaccgaaggggtgagcctcgaggccaaatccctc
aaggccggacaatccctgaatggcgtgaccctgtcgccggcggcctggccgaagagcgac
tggtggacaagcctcggcgacccgcaactcgacggcctgatccgcgaagcgctgcacgac
agcccggacatgcagatcgccagcgcccgggcccatcaggccagcgccgcagcctatgcc
gccgacgcggcgcgcatgccgaccctggatgccagcggcagcgtcagccgctcgcgcctg
gcccgtgaccaggacccgcgcgggcagggcggggcctacagcaccttgcgcagcctgagc
atgaacttcaattacaccttcgacctctggggtggccagcgtgatacctgggaagctgcg
ctgggccaggcccgcgccgccgagatcgatcgccaggccgcccagctgaccctggccgcc
gatgtggcccgggcctacagcgacctgggccaggcgcatatcgtccatgacctggccgcc
gaagacctcaagcgcacccggcagatgctcgaactgagccagaagcgcctgagctcgggc
atcgacagccagtaccagtaccagcagaccgaaagcctggaggccagctccgaagcgtcg
ttgatcgatgccgagaaacggctgcaaagcgccaagatcgccctggcggtattgctcggc
aaggggcccgaccgcggcaacgaaatcgcccggccgaaagtcctgcaagccagtgccgtg
gcgctgccgtcggtgttgccggcggaactgctcggccgccgtccggacctggtggcggcg
cgctggcgggtcgaggcggcgagcaagagcatcgatgccggcaagaccaatttctatccc
aacctcaacctgggcgccgtcgccggcacccaggccttgctgggggatgcgatgttcggt
tcggccagtcgcttcttcaatatcgccccgaccgtgtcgctgccgatcttcgacggcggc
cgcctgcgcgccgacctggacgcccgcgacgccgactacgacctggccgtggcgcaatac
aacaagagcctggtgaatgccctgggggatgtcagcgacaccctgtcccagctgcgtgac
atcggtcggcagatcgccgcccagcaacacgccaccgacattgcccaggactcctacgac
accgtggtgcagcgctacggttcgggtatcggcaactacctggacgtgctcagcatcgag
caacagctgctgcaggcccagcgtcagctggcgaccctgaatgccgagcagatcgacctg
tcgatccaactcatgcaagccctgggcggtggtttccaggtcgacaacctggccgcggcc
actccgaccccagcctcgcgcaatcaataa
DBGET
integrated database retrieval system
