Pseudomonas chlororaphis PCL1606: PCL1606_50980
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Entry
PCL1606_50980 CDS
T03768
Name
(GenBank) RND transporter
KO
K18139
outer membrane protein, multidrug efflux system
Organism
pcz
Pseudomonas chlororaphis PCL1606
Pathway
pcz01501
beta-Lactam resistance
pcz02024
Quorum sensing
Module
pcz_M00642
Multidrug resistance, efflux pump MexJK-OprM
Brite
KEGG Orthology (KO) [BR:
pcz00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PCL1606_50980
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
PCL1606_50980
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcz02000
]
PCL1606_50980
01504 Antimicrobial resistance genes [BR:
pcz01504
]
PCL1606_50980
Transporters [BR:
pcz02000
]
Other transporters
Pores ion channels [TC:
1
]
PCL1606_50980
Antimicrobial resistance genes [BR:
pcz01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
PCL1606_50980
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
PCL1606_50980
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
PCL1606_50980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
AKA26545
UniProt:
A0A0D5Y673
LinkDB
All DBs
Position
complement(5536041..5537552)
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AA seq
503 aa
AA seq
DB search
MPRRISRELKTLSVWALSLAISGCIGTGGIAPQGKALSANTLATDEAIQSAAREARWPAA
QWWRAYGDAQLDRWVESAVQGSPSMAMAAARVRQARAMAGVAESAESLQIKGDATLKRHN
WPTDQFYGPGELANSTTWDNNAALGFSYALDLWGRESNATERAVDLAHMSAAEARQAQLE
LQNNVVRAYIQLSLQYAQRNIVVATLKQQEQILELAQKRLAGGIGTHFEVSQAQTPLPET
HRQLDALDEEIALGRNQLAALAGKGPGAGAQLQRPSLSLAAPLKLPSALPAELLGQRPDV
VASRWQVAAQARGIDVAHAGFYPNVDLVGSLGYMATGGGALEFLTGKKLNYNVGPAISLP
IFDGGRLRAELGEAAAGYDIAVAHYNQTLVNALKNISDQLIRRESMDKQAEFAAESVASA
QQTYDIAMVAFQRGLTDYLNVLNAQGMLFRQQQIQQQVQAARLSAHAELVTALGGGLEAG
GDVPEDSRTVPAKTPAVLAVFDH
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
gtgccgcgtcgcatcagcagagagctgaagactctcagtgtttgggctttatcgttagct
atcagcggctgcatcggaaccgggggcattgccccgcaaggcaaggcattatcggccaac
accctggccaccgacgaggccatccagagcgccgcgcgcgaggcccgctggcctgccgcc
caatggtggcgggcctatggcgatgcccagctggaccggtgggtcgagtcggccgtgcag
ggcagcccgagcatggccatggccgccgcccgggtgcgccaggcgcgggccatggccggg
gtcgccgagtcggcggagtcgctgcagatcaagggcgacgccaccctcaagcggcacaac
tggcccaccgatcagttctatggcccgggcgagctggccaacagcaccacctgggacaat
aacgccgcgctcggcttcagctacgccctggacctctggggccgggaaagcaacgccact
gagcgcgccgtggacctggcgcacatgagcgccgccgaggcgcgccaggcccagctggaa
ctgcagaacaacgtggtgcgtgcctatatccagttgtcgttgcaatacgcccagcgcaac
atcgttgtcgcgaccctgaagcaacaggaacagatcctcgaactggcgcaaaagcgcctg
gccggcggcatcggcacccatttcgaggtcagccaggcgcagaccccgctaccggaaacc
catcgccagctggacgccctggacgaagagatcgccctgggccgcaaccagctcgccgcc
ctggccggtaaaggcccgggggcgggcgcgcaattgcagcgcccgagcctgtctctggcc
gcgccgctgaaactgccgtcggcgctgcccgccgagctgctcggccagcgcccggacgtg
gtcgccagccgctggcaggtggcggcgcaggcgcgcggcatcgacgtcgcccatgccggc
ttctaccccaacgtcgacctggtgggcagccttggctacatggccaccggaggcggggcg
ctggagttccttaccggcaagaagctcaactacaacgtcggcccggccatctccttgccg
atcttcgacggcggccgcctgcgcgccgagctgggcgaggccgcggcgggctatgacatc
gccgtggcccactacaaccagaccctggtcaacgccctgaagaacatctccgaccagttg
atccgccgcgagtccatggacaagcaggccgagttcgccgccgagtcggtggcctcggcg
cagcagacctacgacatcgccatggtcgccttccagcgcggcctgaccgactacctcaat
gtgctcaacgcccagggcatgctgttccgccagcagcagatccagcagcaggtccaggcc
gcgcgcctgagcgcccatgccgaactggtgacggccctgggcggtggcctggaggcggga
ggcgatgtgcccgaggacagccggaccgtgccggccaagaccccggccgtactcgcggtc
ttcgaccactga
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