Paraburkholderia dioscoreae: PDMSB3_1874.1
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Entry
PDMSB3_1874.1 CDS
T08115
Symbol
oprM
Name
(GenBank) Outer membrane protein OprM
KO
K18139
outer membrane protein, multidrug efflux system
Organism
pdio
Paraburkholderia dioscoreae
Pathway
pdio01501
beta-Lactam resistance
pdio02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pdio00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PDMSB3_1874.1 (oprM)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
PDMSB3_1874.1 (oprM)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pdio02000
]
PDMSB3_1874.1 (oprM)
01504 Antimicrobial resistance genes [BR:
pdio01504
]
PDMSB3_1874.1 (oprM)
Transporters [BR:
pdio02000
]
Other transporters
Pores ion channels [TC:
1
]
PDMSB3_1874.1 (oprM)
Antimicrobial resistance genes [BR:
pdio01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
PDMSB3_1874.1 (oprM)
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
PDMSB3_1874.1 (oprM)
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
PDMSB3_1874.1 (oprM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
VVD33158
UniProt:
A0A5Q4ZQB5
LinkDB
All DBs
Position
II:complement(1936396..1937856)
Genome browser
AA seq
486 aa
AA seq
DB search
MRPVGSSFSWVSALGLCLCLSGCLMGPDYVRPSIETPATFRFSDSTQAQIVDTAWWAQFG
DPVLNELISTALAQNRDLKIAAARVDEFRGQFVTTRSQLFPQISAGFNAGRQRVSPLAQS
SLPAGIGTDYTSFNATLPISWEIDAFGRVRRQTEAARANLLASEEGQRATLLTLVASVAT
SYINLRSLDQQLEIARATAASRAGSVKVFELRFKGGQISQVELAQSQSEYEASLADIPAI
EAQIGQQEDALSVLLGRNPGPILRGRTLDELQSPSVPAGLPSELLARRPDVLQAEQNLVA
ANALIGAARALYFPQISLTGLLGSSSTQLSRLFSGPANTWAFAGALTQPIFSAGNIAGQV
EQAQARQQQTLYAYQKAVQSAFQEVSDALLGVGKSCERLVAQERQVDALNAYARLARQRY
EGGYTSYMEVLDAERSLFSAQLAYAQTRGNEYTSLVTLYKALGGGWGADALAALEQGGTG
AQAETR
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgcgtccagtcggttcaagtttttcctgggtgtcggcacttgggctttgcctgtgtctg
agcggctgcctgatgggcccggactatgtcagaccgtctatcgaaacaccggccacgttt
cgcttttcggatagtacgcaggcgcaaatcgtcgatacggcgtggtgggctcagtttggc
gatccagtgctgaacgaactcatttcgaccgcgctcgcgcagaacagggatctgaaaatc
gccgcggctcgagtcgacgagtttcgcggacagttcgtcaccacgcgttcgcaactgttt
ccgcagattagcgcgggtttcaacgcgggtcgccagcgtgtctcgccgcttgcccaaagt
tcgttgccggccggcattggaacggactacacgtcgttcaatgccacgttgcctatctca
tgggaaatcgacgcgttcggccgcgtgcggcgtcagaccgaagccgcgcgcgcgaatctg
ctcgccagcgaggaagggcagcgggccacgctcctcacgctcgttgcatcggtcgccacg
tcctatatcaatctgcgcagtctcgatcagcaactcgagattgccagggcaacggcggcg
agccgcgccggttcggtgaaggtcttcgaactgcgcttcaagggtgggcagatctcgcag
gtcgaactggcccagagccagtcggaatacgaggcgtcgctcgcggatattcccgccatt
gaagcgcagatcgggcagcaggaagacgcgctgtcggtattgctcggccgcaaccccggt
cccattcttcgtggccgcacgctcgacgaactccagtctcccagtgtgccggcgggcttg
ccttcagaattgctcgcgcgccgtccggacgtgctgcaggccgaacagaacctggttgcc
gccaatgcgttgatcggcgcggcgcgtgcgctttattttccgcagatttcgctcacggga
ttgctcggctcgtcgagcacgcagttaagcaggctctttagcggcccggcgaacacctgg
gcgtttgccggagcactgacgcaaccgattttctcggccggcaacattgccggacaggtc
gagcaggcccaggcacgccagcaacaaacgctctacgcgtatcagaaggctgtgcagtcg
gcattccaggaagtcagcgacgcgcttctcggcgtcgggaagtcatgcgaacgtctggtc
gcgcaagagcgccaggtcgatgcgctgaacgcctacgcaagactcgcgcgacaacgctat
gaaggcggctacacgagctacatggaagttctcgacgccgagcgaagtctgttcagcgcg
caactggcttatgcgcaaacccgcggcaatgaatacacgtctctcgtcacgctttacaaa
gcgctgggcggcggttggggcgcggatgcacttgcagcattggagcaaggcgggaccggt
gcgcaagccgaaacacggtag
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