Paraburkholderia dioscoreae: PDMSB3_2950.1
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Entry
PDMSB3_2950.1 CDS
T08115
Name
(GenBank) Efflux transporter, outer membrane factor lipoprotein, NodT family
KO
K18139
outer membrane protein, multidrug efflux system
Organism
pdio
Paraburkholderia dioscoreae
Pathway
pdio01501
beta-Lactam resistance
pdio02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pdio00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PDMSB3_2950.1
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
PDMSB3_2950.1
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pdio02000
]
PDMSB3_2950.1
01504 Antimicrobial resistance genes [BR:
pdio01504
]
PDMSB3_2950.1
Transporters [BR:
pdio02000
]
Other transporters
Pores ion channels [TC:
1
]
PDMSB3_2950.1
Antimicrobial resistance genes [BR:
pdio01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
PDMSB3_2950.1
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
PDMSB3_2950.1
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
PDMSB3_2950.1
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
VVD34234
UniProt:
A0A5Q4YYL6
LinkDB
All DBs
Position
II:complement(3077898..3079319)
Genome browser
AA seq
473 aa
AA seq
DB search
MFRKTSALRCVWAVTACVLSLSACIDVSMPDYKRPDTPAKASWSDQKGAPVSAAATIEPD
WWKGFHDPYLDTLIARAIAGNFDIKVLAARIDVAGTQIGEAKAGALPTMDLGAGADFEKT
THQTFAKQYNVATQVNWDIDIWGKVEKGVQAQKAEFHASEADWRAGYLELVSNVSSTYFQ
ILQFDDQIEQQQKTLETNRQILTIYDGQRRNGLVPQTQVLRQQAEINRLTNQLLDLRRSR
ALANNALCTLIGVPAGEFQMAKGHLQQRVQLPPVPDGLPAQLLARRPDVVAAEFRVLEAY
DLVGQAKLAQLPSISLTGHGGTASFALTDLLKSFTYGFMPSINIPLLDPGVRAHVKVTQA
QSTVAEQQYRVAVMGAFEEVENALVNVNSHKEQRVELQQEVSRLQIVADQIQSQLRLGVV
SQLEVFETERTLLEAQQELLANHQQILSDTVLLYKALGGGWPSVDVQAQVKEH
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgttccgcaagacctcggcgctgcgctgcgtttgggcggtaactgcgtgcgtgctttcg
ctgtcggcctgcatcgatgtcagcatgcccgactacaagcgccccgacacaccggccaag
gcgtcctggtcggatcagaagggcgcacccgtatccgctgccgcgacgatcgaacccgac
tggtggaaaggcttccacgatccctatctcgacacgctgatcgccagggcgattgccggc
aacttcgatatcaaggtactggccgcgcgtatcgacgtggccggcacgcagatcggcgaa
gccaaagccggcgccttgccgaccatggatctcggtgcgggcgccgatttcgaaaagacc
acgcaccaaaccttcgccaagcagtacaacgtcgcgacgcaggtgaactgggatatcgat
atctggggcaaagtcgaaaaaggcgtgcaggcgcaaaaggcggaattccacgccagcgag
gccgactggcgcgccggctacctcgaactggtatcgaatgtttccagcacctatttccag
attcttcaattcgacgaccagatcgagcagcagcagaaaacgctcgaaacgaaccgccag
atcctcacgatttacgacggccagcgccgcaacggcctcgtgccgcaaacgcaggtattg
cgccagcaggcggagatcaaccgcctgaccaatcagttgctcgatctgcgccgttcgcgc
gcgctcgctaacaacgcactttgcacgctgatcggcgtgccggcgggagagttccagatg
gccaaggggcatttgcagcagcgcgtgcaactgccgcccgtgccggacggcctgccggcg
caactgcttgcgcggcgtcccgacgtggtggccgccgagttcagagtgctcgaagcctac
gacctggtcggccaggccaagctcgcacaactgccgagtatcagcctgaccgggcacggc
ggcacagcgagttttgcactgaccgacctgctgaagtcgttcacatacggcttcatgccc
agcatcaacattccgctgctcgatcccggcgtgcgggcgcatgtgaaagtcacgcaagcg
caatctacggttgccgaacagcaatatcgcgtggcggtgatgggcgcgttcgaggaagtg
gaaaacgcgctggtcaatgtgaattcgcacaaggaacagcgcgtggagttgcagcaggag
gtgtcgcggctgcaaatcgtggcggaccagatccagtcgcaattgcggctcggcgtggtg
tctcagctggaggtcttcgaaaccgagcggaccttgctggaggcgcagcaggaactgctc
gccaaccatcagcagattctgtccgacacggtgctgctttacaaagcactgggcggcggc
tggccgagcgtggatgtgcaggcacaagtaaaggaacactga
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