Candidatus Pantoea soli: D8B20_20100
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Entry
D8B20_20100 CDS
T06714
Name
(GenBank) efflux transporter outer membrane subunit
KO
K18139
outer membrane protein, multidrug efflux system
Organism
pdis
Candidatus Pantoea soli
Pathway
pdis01501
beta-Lactam resistance
pdis02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pdis00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
D8B20_20100
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
D8B20_20100
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pdis02000
]
D8B20_20100
01504 Antimicrobial resistance genes [BR:
pdis01504
]
D8B20_20100
Transporters [BR:
pdis02000
]
Other transporters
Pores ion channels [TC:
1
]
D8B20_20100
Antimicrobial resistance genes [BR:
pdis01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
D8B20_20100
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
D8B20_20100
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
D8B20_20100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
NAD_binding_7
Motif
Other DBs
NCBI-ProteinID:
QDY44456
UniProt:
A0A518XK10
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All DBs
Position
unnamed2:complement(6133..7539)
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AA seq
468 aa
AA seq
DB search
MNFAHFKLAALPALIVMVTSGCTLQPDYKRPEAPVTKQWNDKSTHGAVASEMAWSEFFSD
PTLRQLITLALKNNSDLKVAALNVESARAQYGVTRADLFPSVGASLTKTAEHLPGGLYST
QTTGPVTYQQYEGNLAVSSWELDFFGRIRSLRDEALETYFSYEATRQATQLSLIAEVAQA
YITLCADADLKKVAKDTAESQQESLKLAQQKFAAGIVTEQDVLQAATSVKSAEADVSQYE
RQRRQAANALQLLLGTSLPAGVVENATLEKRWVFPELDSGLPSDVLTRRPDVIAAEHTLK
AANANIGAARAAFFPSISLTASGGSASSSLSRLFDGGTGAWSFGPSISIPIFEGGKNRAN
LDVAEVSKRTEIVNYEKAIQQAFKEVSDALSGAATYDAEVQSRKENFEVNNRNYQLAALR
YNNGADGYLEVLTAQRSLYSARQNYLSTLADSLDQKITLYKVLGGGWK
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
attaacttcgcgcatttcaaactggctgccttaccggctctgatcgttatggtcacgtcc
ggctgcaccctgcaacccgactacaaaaggcctgaagcgcccgtgaccaaacagtggaat
gataaatccacccatggtgccgtcgcgtcggaaatggcatggtcagagtttttctctgac
cccaccctgcgccagctcatcacgctggcgcttaaaaataacagcgatctgaaggtcgct
gctctcaacgttgaatcggccagggcgcagtatggcgtgacccgcgcagatttgtttccg
tcagtaggcgccagcctgaccaaaacagctgaacacctgcccggaggcctttattcaacg
cagacaaccggccctgtaacctatcagcagtatgaaggaaatcttgccgtcagttcctgg
gagctcgattttttcggcaggatacgcagcctgagagatgaggcgcttgaaacctatttc
tcatacgaggcaacgcggcaggcaacgcaactgtcgctgattgccgaggtcgctcaagct
tatataacgctctgcgccgacgcggatctgaaaaaagtggcaaaagacacggccgaaagc
cagcaggaatcactgaagcttgcgcagcagaaatttgctgccgggatcgtcactgaacag
gacgtgctgcaggcggcgacctcagtgaaaagcgctgaagcggacgtttcacaatacgaa
aggcagcgtcggcaggccgctaatgccctgcagctgttgctcggcacgtcgctgccggct
ggggtggttgaaaacgccacgcttgaaaagcgctgggtcttccctgagctggactccgga
ttaccttcagatgttcttacccgcagacctgacgtcatcgcggccgagcatactttaaaa
gcggccaacgccaatattggcgccgcgcgcgcggcgttcttccccagcataagcctgacg
gcttccggcggctctgcctcctcaagtctgagcaggctgtttgacggggggaccggagcg
tggagcttcgggccttccatcagtatcccgatatttgaaggcgggaagaacagggcaaac
ctcgatgtcgctgaagtgtcgaagcggacagagattgttaactatgaaaaggctattcag
caggctttcaaagaggtttctgacgcattaagtggagcggcaacatacgatgctgaggtc
cagtcaaggaaggaaaactttgaggtcaacaaccgcaattatcagctggccgcactccgt
tacaacaacggcgcggatggttatctggaggtgttaactgctcagcgttccctgtattct
gccaggcaaaattacctgagcactttagcagactctctcgaccagaagatcactctgtac
aaggtgcttggcggaggctggaagtaa
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