Pedobacter sp. WC2423: AB3G38_02365
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Entry
AB3G38_02365 CDS
T10715
Name
(GenBank) TolC family protein
KO
K18139
outer membrane protein, multidrug efflux system
Organism
pedo Pedobacter sp. WC2423
Pathway
pedo01501
beta-Lactam resistance
pedo02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pedo00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
AB3G38_02365
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
AB3G38_02365
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pedo02000
]
AB3G38_02365
01504 Antimicrobial resistance genes [BR:
pedo01504
]
AB3G38_02365
Transporters [BR:
pedo02000
]
Other transporters
Pores ion channels [TC:
1
]
AB3G38_02365
Antimicrobial resistance genes [BR:
pedo01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
AB3G38_02365
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
AB3G38_02365
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
AB3G38_02365
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
XDC11690
LinkDB
All DBs
Position
681789..683174
Genome browser
AA seq
461 aa
AA seq
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MMNNNYKWLIPALLLMASCQVTKKYEAAAVPASTNYRSIKISDTISTASVPWKSFFADTV
LQDLIAEGISNNLDLKIAYQRIVSSRTGLWRSKQAFIPELNSTIGIKQSKLPFPQGFGLV
KDATQFDIGLQMNWEVDIWGRLGSAKKSAYAELMATQEAQRAIQTQLVADIASNYISLLS
LDSQLELLQKTVKNRKEDVETMEALNASNIVNGAAVVQSKANHAAAKVAIPEVKKQIFET
ENAICALLNREQGNVERGSLANFSLPESLQTGVPSALLQNRPDVKQAEQLLRAAFQHTNV
ARTSFYPSLRITGGSGFSSFNFKNLFTVSSLFANIAGGLTQPILARGENKAKLKIMESEQ
QIALYNFQKVMVVAAKEVSDAMFTIQTAQEKQTERTSQVRFLEQSVEFTKELLRYNSSTN
YTDVLTSENNLLNAQSGNIEDKVQKLQGIILLYKALGGGWR
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgatgaacaacaattataaatggcttatacccgcactgctgcttatggcatcgtgccag
gtaaccaaaaaatatgaggcggcggcggtacctgcgtccaccaactatcgatcaattaaa
atttcggataccatcagcacagcaagtgtaccctggaagtccttttttgctgatacggta
ctacaagacttgatcgccgaagggattagtaataatctcgatctgaaaatagcctatcag
cggattgtatcttcaagaaccggtttatggagaagcaaacaggccttcattccggaacta
aacagcacaataggcatcaaacaatccaaacttccttttccacaaggttttgggttggta
aaggatgccacgcaatttgatattgggctacagatgaattgggaagtcgatatttgggga
agactgggaagtgccaagaaatcagcttatgcagaacttatggctacccaagaggcacag
cgggcaatacagacgcaactggttgctgatattgccagcaactatatatctttgctctct
ttggacagccaacttgaacttctacaaaagacggtcaaaaaccgtaaagaagatgtagaa
accatggaggcactgaatgcatcaaatattgtaaatggtgcagcggtagtacagagtaaa
gcaaaccatgcggccgccaaagttgctattcctgaagtaaaaaaacagatcttcgagact
gaaaatgcaatttgcgctttattgaaccgtgaacagggtaatgtggaaagaggatctctg
gccaactttagtttacccgaaagcttgcagactggtgtaccatccgcgctactgcaaaac
aggccggacgtaaaacaggcagagcagttgttaagggcagctttccagcatacaaatgtg
gcaagaacctccttttacccaagcttgaggattacaggcggttccgggttttcgagcttt
aattttaagaatttatttactgtaagcagtctgtttgctaatattgcaggagggctaaca
cagcccatcctggccaggggcgagaataaagcaaagctcaaaattatggaatccgagcag
caaatagccctgtataacttccagaaggtaatggtggtagctgcaaaagaagtatctgat
gcgatgtttaccattcagactgcccaggaaaagcagactgaacgtacttcgcaagtcagg
tttctcgagcaatcggtagaatttaccaaagaactactgaggtacaattcctcaacgaac
tataccgatgtactcacctctgagaataatcttttaaatgcacaatcaggaaacattgaa
gataaagttcaaaagttacagggaataattttgttatacaaggccttaggtggaggatgg
agataa
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