Pedobacter sp. WC2423: AB3G38_07205
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Entry
AB3G38_07205 CDS
T10715
Name
(GenBank) TolC family protein
KO
K12340
outer membrane protein
Organism
pedo Pedobacter sp. WC2423
Pathway
pedo01501
beta-Lactam resistance
pedo01503
Cationic antimicrobial peptide (CAMP) resistance
pedo02020
Two-component system
pedo03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
pedo00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
AB3G38_07205
09132 Signal transduction
02020 Two-component system
AB3G38_07205
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
AB3G38_07205
01503 Cationic antimicrobial peptide (CAMP) resistance
AB3G38_07205
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pedo02000
]
AB3G38_07205
02044 Secretion system [BR:
pedo02044
]
AB3G38_07205
01504 Antimicrobial resistance genes [BR:
pedo01504
]
AB3G38_07205
Transporters [BR:
pedo02000
]
Other transporters
Pores ion channels [TC:
1
]
AB3G38_07205
Secretion system [BR:
pedo02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
AB3G38_07205
RTX toxin transporter
AB3G38_07205
Multiple protein transporter
AB3G38_07205
RaxAB-RaxC type I secretion system protein
AB3G38_07205
Antimicrobial resistance genes [BR:
pedo01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
AB3G38_07205
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
AB3G38_07205
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
I_LWEQ
Motif
Other DBs
NCBI-ProteinID:
XDC12633
LinkDB
All DBs
Position
complement(1836667..1837962)
Genome browser
AA seq
431 aa
AA seq
DB search
MKKLFFIISLIALSPVLHAQENAGDLKTLINQSFTYFPQFKELGQAIDVEQQRIMLAKSA
GLPNVQATGSYRYTSPVSQISIPAGDHALDLQIMPKNNYNASLDASYTLWDFGVVKAGVD
RAKAGLEYAKDNLEFNQNQMAFQVGNIYYQIAYLKNAISIQDSVINFLEVNKKDTEIKFK
NGDALKYDVLSIQSSIDQEGNRKIELQNSLNKQYALMEYATGTRIKENSSDFVFPAANKY
DLNEAVAEAQNNHPEFRLIKDRIQQAEAELKVSQTNGKPSLIMSGGTGYKNGFTPDLDKF
RYNYSAGVTLNIPIYEGGRAKKQVRLSQSQLLAAKYSEGTLNNTYRKDIQQAMIDISSNT
SSLVNSARQITEAKEAQKLAYSRYRNGIGTNLELTSASTNVQKAELTNLQYQYQLCIAQL
TIAKLTGLKYW
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagttattctttattatatctctgattgcactgtctccagttttgcatgcacag
gaaaatgcaggagatctcaaaacattgatcaatcagtcatttacttatttcccccagttt
aaagaactcgggcaagctatagatgtcgaacaacagcgcataatgctggctaagtctgct
ggtttgcctaatgtacaggccacgggcagctacaggtatacaagcccggtatctcaaatc
agtattcctgctggtgatcacgcactcgatctccagattatgcctaaaaacaattacaat
gcatcactggatgcaagttatacgctttgggattttggtgtggtaaaagctggtgtggac
cgtgctaaagcagggttggaatatgcaaaagataacctggagtttaatcagaaccagatg
gcatttcaggtaggtaatatttactaccagattgcttatcttaaaaatgcgatctctata
caggatagtgtaatcaattttctggaggtcaataaaaaagataccgaaataaagtttaaa
aatggagatgccctaaaatatgatgtactttctattcagtccagcattgatcaggaggga
aatcgtaaaatagaacttcaaaatagcctgaataagcaatatgccttgatggaatatgca
acaggaacaaggattaaggagaattcctcagattttgttttccctgcagccaacaaatat
gacctgaatgaagcagtggcggaagctcaaaataaccatccggagttcagactgattaaa
gacaggattcaacaagcagaggctgaacttaaagttagtcagactaatggtaagccttca
ctgatcatgagtggaggaaccggttacaaaaatggctttacaccggatcttgataaattc
aggtataactattcggctggtgtaacgcttaatattccaatttatgaaggtggaagagcc
aaaaagcaggtgaggttatcacaaagtcagcttttagctgctaagtattcagaaggaacc
ttgaataatacttatcgtaaagatattcagcaggcgatgattgatatttcgagcaacact
tccagcctggtgaattcagcaagacagattacagaagctaaagaagcacaaaaactggcg
tatagccggtatagaaatggaattgggactaatctggagctgaccagtgcaagtaccaat
gtacaaaaagcagaattaaccaatttacaataccaatatcagttatgtattgcacaactg
actattgcaaaactaacgggtttaaaatactggtaa
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