Pedobacter sp. WC2423: AB3G38_14275
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Entry
AB3G38_14275 CDS
T10715
Name
(GenBank) TolC family protein
KO
K12340
outer membrane protein
Organism
pedo Pedobacter sp. WC2423
Pathway
pedo01501
beta-Lactam resistance
pedo01503
Cationic antimicrobial peptide (CAMP) resistance
pedo02020
Two-component system
pedo03070
Bacterial secretion system
Brite
Transporters [BR:
pedo02000
]
Other transporters
Pores ion channels [TC:
1
]
AB3G38_14275
Secretion system [BR:
pedo02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
AB3G38_14275
RTX toxin transporter
AB3G38_14275
Multiple protein transporter
AB3G38_14275
RaxAB-RaxC type I secretion system protein
AB3G38_14275
Antimicrobial resistance genes [BR:
pedo01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
AB3G38_14275
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
AB3G38_14275
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Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
XDC09118
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Position
3467334..3468656
Genome browser
AA seq
440 aa
AA seq
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MTKRVKSIPILMLCLLFANLVNAQEQLTLKDALNFAIENNTNVRKAKLDIDGGKYKTQEV
KAQALPQISANAGLTYNPIIGQLVFGDQAFTLGRKWNSNAGIQLSQQLFNQQVFTGLKAS
KTSEKYYNLNANLTEEQIIELVANNYYQVLVSRQQLNVIDTNIKNVKVVEKIIANQYQNG
LAKKIDVDRIKVNLTNLETQREQTINAVIQLENQLKYSMGMPVSTTITLPPDEFSKVETL
PAMADSVNLENRTEIRLLNVQKDLLGLQRKAYVAEYYPQLSLTANLSKTGQSDKFDLFSK
HGTAFYYDASAIGLALKIPIFSGFATRSKIRQADVNIKKNDEDIRETKNTLNLAYENAKI
QLRNNINTIKSQRQNVLLAQEIYNSTQNNYNNGLAALTDLLDTENALTSAQNSYTQALLN
YKIAEIQLIKSNGNIKSLLK
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgactaaaagagtaaaatcaattcccatcttaatgctctgcctgctgttcgccaacctg
gtgaatgcacaagaacagcttacgctgaaagatgcacttaattttgccatcgaaaacaat
acaaatgtgcgtaaagcaaaactggatatcgatggtggtaaatacaaaacacaggaagta
aaggcacaggcactgccacaaatttcagcaaatgccggattgacttacaacccgattatc
ggacagcttgtttttggtgatcaggcatttaccttaggaagaaagtggaattccaatgcg
ggtatacaattaagtcagcagttattcaaccagcaggtttttactggcctgaaagcttca
aagaccagcgaaaagtactataacctgaatgcaaatctgactgaagaacaaattattgaa
ttagtagccaataattattaccaggttttagtaagcagacaacaattgaatgttatagac
accaacatcaaaaatgttaaagttgtagagaaaatcattgccaatcaatatcaaaatggc
ttagctaagaaaattgatgtggaccggatcaaagttaatttgacgaatttggaaacacag
cgtgagcaaactataaatgcagtaatacaactggaaaatcaattgaaatattcaatgggc
atgcctgtttcaacaaccataactttaccacctgatgaattcagtaaagtagaaacctta
cctgcaatggcagatagtgttaacctggagaacagaacggaaatcagattattgaatgtc
caaaaagatttattaggcttgcagcgtaaagcctatgttgctgagtattatccgcaactg
tccttaacagctaacttatccaaaactggtcagagtgataaattcgatttattcagcaag
cacggaactgctttttactatgacgcttcggcaataggactcgctttaaaaataccgata
ttcagtggttttgccacacgctcgaaaatacgtcaggcagatgtgaatatcaaaaagaac
gatgaggatatcagagaaacaaaaaacactttgaacctggcttatgaaaatgccaaaatc
cagttgagaaacaatatcaatacgattaaatctcagcgtcagaatgtactgctggctcag
gagatctacaacagcactcaaaacaattataataacgggcttgctgcactgacagatctt
ctggatactgaaaacgcattaacatctgcacaaaacagctatacccaggccttactgaac
tacaaaattgccgaaatacaactaatcaaatcaaacggaaatataaaatcactattaaaa
tga
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