Pedobacter sp. WC2423: AB3G38_24120
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Entry
AB3G38_24120 CDS
T10715
Name
(GenBank) TolC family protein
KO
K12340
outer membrane protein
Organism
pedo Pedobacter sp. WC2423
Pathway
pedo01501
beta-Lactam resistance
pedo01503
Cationic antimicrobial peptide (CAMP) resistance
pedo02020
Two-component system
pedo03070
Bacterial secretion system
Brite
Transporters [BR:
pedo02000
]
Other transporters
Pores ion channels [TC:
1
]
AB3G38_24120
Secretion system [BR:
pedo02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
AB3G38_24120
RTX toxin transporter
AB3G38_24120
Multiple protein transporter
AB3G38_24120
RaxAB-RaxC type I secretion system protein
AB3G38_24120
Antimicrobial resistance genes [BR:
pedo01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
AB3G38_24120
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
AB3G38_24120
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
XDC11014
LinkDB
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Position
complement(5735038..5736327)
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AA seq
429 aa
AA seq
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MKILFLSIISMGLAYTANAQHIVSLEQSRQAALAYSTAIKNGQLKVSSADFGLAAAKSSY
LPSVSGTGLGLYGFKDFVPAIPGLLNKGINNLYLIGVTAIQPIYAGGKIETGYKLAALQQ
ETSKIMARQSVDSVLLLTTQKYWNVVNLQEQEKTLAANEVLLNNVLKMQKDMLASGLIAR
NDLLKVKVQLSQLLVNRSKLQNGRRLALFDFSIYTGMPYDSLMVMQDTLDKGNEPLLPGG
TPDTTLSGIANYQLLLKQVQGEGLQTKLSKADYLPSLSVGMSASQAGSFNKTIGSTFVPA
ALATLSVPISDGLWGRTKQKMKQRKISEQIAQNNLRDGSDQLQVGILKSWYDMKDELTQI
RYAKENLLQATENLKVSQDNYKAGLSTATDVLDAQAFYQQAAVTLNTAYSDFQVKKAAYA
YATGKINSK
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcctatttttatccatcatatccatgggcctggcttataccgccaatgcccag
catatagtgtcacttgagcaaagcaggcaagccgctttagcgtacagtaccgctatcaaa
aacgggcagctcaaagtaagctcggcagactttggactggctgctgccaaatcttcctac
ctgccatctgtcagtggtactggcctgggcttatatggcttcaaagattttgtaccggct
attccgggcctgttgaataaaggcatcaataatctctacctgattggtgtaactgccatc
cagcccatttacgcaggtggtaaaattgaaacgggttataagctggctgctttacaacag
gaaacgagtaagataatggccaggcaatcggttgattcggtattactgctcactacgcaa
aaatactggaacgtggtcaacttgcaggagcaggaaaaaacgctggcagctaatgaagtg
ctgctgaataatgtgctgaaaatgcaaaaggatatgctggcttccggattgattgcccgc
aatgacctgctgaaagtaaaagttcagctcagtcagctgcttgttaaccggagcaaactg
caaaacgggcggagactggccttatttgatttttccatatacaccggcatgccatatgac
tcattgatggtgatgcaggacacgcttgacaagggaaatgaacctttgcttcctggtgga
acaccggatacaacactttcaggaatagccaattaccagttgctcctcaaacaggtacag
ggtgaaggcctgcaaaccaaattaagtaaagcagattatttgccgagtttatctgtcggg
atgagtgcttcgcaggcaggctcattcaataagacgataggcagtacgtttgtaccggca
gccctggctaccctgagtgttcctatttcggacggcttatggggccgtactaaacaaaag
atgaaacaaagaaagatcagcgaacaaattgctcaaaacaatttaagggatgggagcgat
cagctacaggtaggtatcctgaagtcctggtatgatatgaaagatgaactcacgcaaatc
cggtacgctaaagaaaacctgttacaggcgactgaaaacctgaaagtaagtcaggacaac
tataaagcgggattgagtacagcaactgatgttttggatgctcaggccttttaccaacag
gctgcagtaacactaaataccgcttattcagattttcaagtgaaaaaagctgcgtatgca
tatgcgaccggtaagattaatagtaaatag
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