Pedobacter sp. WC2423: AB3G38_24820
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Entry
AB3G38_24820 CDS
T10715
Name
(GenBank) efflux transporter outer membrane subunit
KO
K18139
outer membrane protein, multidrug efflux system
Organism
pedo Pedobacter sp. WC2423
Pathway
pedo01501
beta-Lactam resistance
pedo02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pedo00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
AB3G38_24820
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
AB3G38_24820
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pedo02000
]
AB3G38_24820
01504 Antimicrobial resistance genes [BR:
pedo01504
]
AB3G38_24820
Transporters [BR:
pedo02000
]
Other transporters
Pores ion channels [TC:
1
]
AB3G38_24820
Antimicrobial resistance genes [BR:
pedo01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
AB3G38_24820
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
AB3G38_24820
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
AB3G38_24820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
XDC11152
LinkDB
All DBs
Position
5888324..5889736
Genome browser
AA seq
470 aa
AA seq
DB search
MKSYKSIYTALLLVLVLGACKVSKDIPLPVNAAPEKFRGSVSADTASIAALPYKDFFKEQ
TIRNLIDTAIVNNYDMQIALKNMEAAALLFSQSKLGNLPELNLKVAASSSRPSDNSLNGL
QIGQFSQSKHIEDYSVTGGLSWEADIWRKIANQRNAAGAAFMQSAEVKKAVQTRLVSNIA
QSFYRLIMLDTQLEIAKKNLSLNDSTLNIIRLQFDAGQVTSLAIQQAEAQQLVAAGLVPQ
LEQRIALEENALSILTGAFPKTIARIGTLNSINVQDQVSSGIPSRMLSLRPDVKSAELEL
VKANAKVGIAKASLYPSLVITANGGLNSFKASNWFNIPGSLFGVVAGGITQPIFQRKQLR
TQYEVALVDREKSVIQFRSSVLTAVGEVSDELVKIEKLKEQYVIADKRVRTVQNSLSNAN
MLFKSGMANYLEVINAQSNALQSELDLATVKTAQLNAVVELYRALGGGWK
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgaaatcgtataaaagtatatatactgctcttttacttgtactcgtgctgggtgcttgt
aaagtatctaaagatattcccttaccagtaaatgctgctcctgaaaaattcaggggtagt
gtttcagctgatacggcgagtattgcagcactgccttataaagatttttttaaggaacaa
acgatcaggaatctgattgatactgcaatcgtgaataattacgatatgcagattgcactg
aaaaatatggaagctgctgctttgttatttagtcagtcgaaattgggtaatttaccagaa
ttgaatctgaaagtagcggcaagttcaagccgtccttcagacaatagtttgaatggtctg
cagattggccagttttctcagtctaaacatattgaggattatagtgtaactggtggatta
agctgggaggcagacatctggcgcaaaattgcgaatcagagaaacgcagcaggtgcggct
tttatgcagtctgctgaggttaaaaaagctgttcaaaccagattagtatcaaatattgca
cagagtttttacagattgatcatgctggatactcagctggaaatcgctaagaaaaacttg
tctttaaatgacagtacgttaaatattatcaggttacagtttgatgcgggtcaggtgact
tcattggccattcagcaagctgaggcgcaacagttggttgctgctggcctggttcctcaa
ctggagcaaagaatcgctttggaagagaatgctttaagtattttaacgggtgctttccct
aaaactattgcaagaataggaactttaaattcgatcaatgttcaagatcaggtaagtagt
ggtattccttcccgcatgttaagtttaagacctgatgtgaaaagtgcagagctggagtta
gtgaaagcgaatgcgaaggttgggattgcgaaagcaagtttatatccttcattagtgatt
actgcaaatggtggtttgaattcgtttaaagcgagtaactggtttaatattccaggctca
ttgtttggtgtggttgctggtgggattacgcagccgatttttcaacgtaaacagttaagg
actcagtatgaggttgctttagttgaccgtgagaaatcagtgatccagttcagatcttcg
gttttgactgcggttggtgaggtttctgatgaactggttaaaattgagaaattgaaagaa
cagtatgtgattgctgataaaagagtcagaactgtgcagaatagtttgagtaatgcgaat
atgttgtttaaaagcggcatggcgaattatttagaagtgattaatgcacagagtaatgcg
ttacagagtgagctggatttagcgactgtaaaaactgcacagttgaatgcggtagttgaa
ttgtacagagctttaggcgggggttggaagtaa
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