Planctopirus ephydatiae: Spb1_38180
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Entry
Spb1_38180 CDS
T06220
Name
(GenBank) outer membrane channel protein
KO
K12340
outer membrane protein
Organism
peh
Planctopirus ephydatiae
Pathway
peh01501
beta-Lactam resistance
peh01503
Cationic antimicrobial peptide (CAMP) resistance
peh02020
Two-component system
peh03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
peh00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
Spb1_38180
09132 Signal transduction
02020 Two-component system
Spb1_38180
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Spb1_38180
01503 Cationic antimicrobial peptide (CAMP) resistance
Spb1_38180
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
peh02000
]
Spb1_38180
02044 Secretion system [BR:
peh02044
]
Spb1_38180
01504 Antimicrobial resistance genes [BR:
peh01504
]
Spb1_38180
Transporters [BR:
peh02000
]
Other transporters
Pores ion channels [TC:
1
]
Spb1_38180
Secretion system [BR:
peh02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
Spb1_38180
RTX toxin transporter
Spb1_38180
Multiple protein transporter
Spb1_38180
RaxAB-RaxC type I secretion system protein
Spb1_38180
Antimicrobial resistance genes [BR:
peh01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
Spb1_38180
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
Spb1_38180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
QDV31872
UniProt:
A0A518GTF9
LinkDB
All DBs
Position
4817930..4820083
Genome browser
AA seq
717 aa
AA seq
DB search
MSRTGLLDQHDFKPVGRLESTVMDHTRIGILAWFGRWLPAIRPSGRLLCRIQRRFSLFVR
QSGGRCLATASLLGMLTPTPIAAQEERPWKLILPEQRSIQLQTPPQIPVDVPMGGPPTTV
TSPGERVEWLLSLDEAIHIAIQNSEAIRVAGGASVRVTGQTIYDVAIANTKIDAERAQFD
PTLGIDNTFVRQDIPTAGLIVPNPRQRRISGFTRDGYNHATGIEKLNPLGGLTRFDIETN
VQRTKPTIAQLNPLTTTRAGVSYVQPLLLGAGQDVTMAPIRIAQLETDRTFFQFKNSVQD
MVHAVIQAYWRLAAARITVWATEKQVEQSRFASERAEARMRAGLADSAEVSQTRLAYYNF
RSAQIVAKNAQLDTENLLRNLLFLPPESETEIIPSTALHTETMNFEWNELLAIVEECRPD
LQELRTTVLADNQRIILAKSQALPQLNLVSAYGWTNTQGEQRNRNGVVSNFNASGSRYTD
WTLGVNFDMPLGLREGRANVRGQELNYARDLANLRTRSHTAVHDVASAVRAVDRNYAEYQ
SYRMAREAAALNLEQQRIEYDNGRTIFLNLLLAISDWGTSVSQEIDALSRFNTELANLER
QTGTILETHAIYFEQEKMRTTGPLGPHHPVDYPRDLRPTPNAPRYGAEPTPPEKKYFDED
SIPTTEPTLDPTETGKASVDPPTKSGWAASLTDTITGRRFRQKNSADRSRATSEEIP
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atgagccgcacaggtttgctcgaccagcatgatttcaaaccggttggccgattggagagt
acagtgatggatcacacacgtatcggcatcttggcctggtttggtcgctggctacccgct
attcgtccgagcggtcgtcttttgtgccgcattcaaaggcgcttcagccttttcgtgagg
cagtctgggggcagatgcctggcgacagcgagcttgctcggaatgttgacccccacaccc
atcgccgctcaggaagagcggccctggaaactgattctgcccgagcaacgcagcattcaa
cttcagacgccgccgcagattccggtcgatgtccctatgggtggccctcccacaacagtc
acgtcgcctggtgaaagggtggagtggctgctgtcgctcgacgaagccattcacattgca
atccagaattccgaagccatccgcgttgctggcggggccagtgttcgtgtcaccgggcaa
accatctacgatgtggcgattgccaatacaaagattgacgccgaacgagcccaattcgat
ccgacactggggatcgacaacaccttcgtgcgacaggacatccccactgctggcctgatt
gttccgaatcctcgtcagcggagaatcagcggattcacaagagacggctacaatcacgcc
accggaatagaaaaactcaatccgctagggggcctaacgcgatttgacattgaaacgaac
gtccagagaaccaaaccaacaatcgcgcagctcaatccactaaccacgacacgtgcgggt
gtcagctatgtgcagccgctgctgctgggggcgggacaggacgtcacgatggctcccatt
cgcatcgcacaattggaaaccgatcggacgttctttcagttcaaaaacagcgtccaagac
atggtgcatgcggtgatccaagcctattggagattggcagccgcgcgaatcactgtctgg
gcgacagaaaagcaggtcgaacaaagtcgcttcgcctccgaacgggccgaggcacgaatg
cgagccgggctcgccgattcagccgaggtctcacaaactcggttggcctactacaacttt
cgttcagctcagatcgtcgcgaagaatgctcagctcgacacggagaatctgcttcgaaac
ctcctcttccttcctcccgagtcggagacggagattatccccagcacggccctgcatacc
gaaacgatgaatttcgaatggaacgaattgctggccatcgttgaagaatgtcgacccgat
ctgcaggagttacgaacgaccgttctcgcggataatcaacgcatcatcctcgccaagtca
caggctttgccccaattgaacctggttagtgcctatggttggacgaacacgcagggggag
cagcgaaaccgcaatggcgtcgtttccaacttcaacgccagcggcagccgctacaccgac
tggacattgggcgttaactttgacatgccattgggtctgcgcgagggtcgcgctaacgtc
cgtggtcaagagttgaactatgcccgcgatcttgccaatcttcgaacacggtctcatacc
gctgttcacgacgttgcctcagcagtgcgagcagtcgaccggaactacgccgaataccag
tcttatcgtatggctcgagaggccgcggcgctcaatctggagcagcagcgcattgagtat
gacaacgggcgtacaatttttctgaatctactcttggcgatttcggattggggaacttcc
gtcagccaggaaatcgatgccctttcgcgtttcaacacagaactcgccaacctcgaacgg
caaaccggtaccattcttgaaacgcatgcaatctatttcgagcaggaaaagatgcgaaca
acggggcctctcgggcctcatcatccggtggactatccacgtgacttgcgaccaactccc
aatgcgcctcgctatggtgcggagcccacaccacctgagaaaaaatattttgacgaagat
agtataccaacgactgaaccgactttggaccccaccgaaactggcaaagcttcggtcgat
ccgcccaccaagtcagggtgggcggcatcactgactgataccattaccggacggcgcttc
cgacagaaaaactccgccgatcgctcccgtgccaccagcgaggaaattccctaa
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