Pedobacter sp. KBS0701: FFJ24_006305
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Entry
FFJ24_006305 CDS
T06361
Name
(GenBank) TolC family protein
KO
K12340
outer membrane protein
Organism
pek
Pedobacter sp. KBS0701
Pathway
pek01501
beta-Lactam resistance
pek01503
Cationic antimicrobial peptide (CAMP) resistance
pek02020
Two-component system
pek03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
pek00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
FFJ24_006305
09132 Signal transduction
02020 Two-component system
FFJ24_006305
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
FFJ24_006305
01503 Cationic antimicrobial peptide (CAMP) resistance
FFJ24_006305
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pek02000
]
FFJ24_006305
02044 Secretion system [BR:
pek02044
]
FFJ24_006305
01504 Antimicrobial resistance genes [BR:
pek01504
]
FFJ24_006305
Transporters [BR:
pek02000
]
Other transporters
Pores ion channels [TC:
1
]
FFJ24_006305
Secretion system [BR:
pek02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
FFJ24_006305
RTX toxin transporter
FFJ24_006305
Multiple protein transporter
FFJ24_006305
RaxAB-RaxC type I secretion system protein
FFJ24_006305
Antimicrobial resistance genes [BR:
pek01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
FFJ24_006305
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
FFJ24_006305
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
IMPDH
Motif
Other DBs
NCBI-ProteinID:
QDW24452
LinkDB
All DBs
Position
complement(1603528..1604988)
Genome browser
AA seq
486 aa
AA seq
DB search
MRGKFLLMGLLIMVTLKGFAFPKTDTLQFTLQQVVEMAKANSIAAKQAITVKETKYWEWR
TFKSNYQPQLALEGILPGYTKTYTQVQQPNGSILFQPVHYDNSSLTLNFSQSIAATGGNI
YGTTQLQRFDDFDRKSVLYNGIPYGIGYTQPLLQFNSLKWDKKIEPLKFNESKQVFIETQ
EKIAITVTEYFFDLLLAQVNLNIADLNYGNTKRILTIAGTKFELGKISKNEMLQLQLEVL
NAQKAVGTAKRDVEIATLNLRSYIGIEGDDRIKLQMPAVVAQMTVITDKVLAEAFENRSD
AIGFIRRLAEAKRDVAKAKGENGLTATLRANLGFSNAANSAFDIYRSPKNQQSVELKLAI
PVMDWGRSKSRTKTAQANEQFITYAVEQDKQTFKQQIVTQVTLFNMMKEQILLTDEAEKI
AAEKYKIASERYVLGNLSISDLSIAFQENDRAKRDYVSSLRDFWGAYYQLRYLSLYDFEK
NRKITY
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgcggggaaaatttttacttatgggtttattgattatggttactttgaaaggttttgca
tttccaaaaacagacaccctgcaattcaccttacaacaggttgtggaaatggcgaaggca
aattctattgccgccaaacaggccatcaccgtaaaggaaaccaaatactgggagtggcgt
acattcaaatccaattaccagccacaactcgcattggaagggattttgcccggatacacc
aaaacctacacgcaggttcagcagcccaacggaagtatactttttcaacctgtacattac
gataactcctcgttgacattaaattttagtcagagcatagccgctaccggaggaaacatt
tatgggaccacacagttacagcgttttgacgatttcgacagaaaaagtgtgctgtacaac
ggaatcccctacggcattggttatacacaacccttactacagtttaacagcctaaaatgg
gacaaaaaaatagaaccattaaaattcaatgaaagcaaacaggtttttatagaaacacag
gaaaaaattgccataacggttacagagtatttttttgatttgttactggcacaggttaac
ctgaacattgccgatttaaattatgggaataccaaacgcattttaaccattgccggtaca
aaattcgaattgggcaaaatctctaaaaatgaaatgctgcagcttcagttagaagtgtta
aatgcgcagaaagcagtgggtaccgcaaaacgcgatgtagaaattgccaccttaaacttg
cggagttacattggcattgaaggcgacgacaggattaaactacagatgcctgcagtagtg
gcccaaatgaccgtcattacagataaagttctagccgaagccttcgaaaaccgttcggat
gctattggctttatccgccgtttggccgaagccaaaagagatgtagcaaaagcaaaaggc
gaaaatggcttaactgcaaccttgagggctaacctcggtttctccaatgcggcaaacagt
gcattcgacatttaccgttcgccaaaaaaccagcaatctgtcgaattaaagcttgctatc
cccgtgatggattggggaaggtctaaatcgcgaaccaaaactgctcaggccaacgaacaa
tttatcacctatgctgtagagcaggataaacagacgtttaaacaacagattgtaacgcag
gtaacactttttaacatgatgaaagaacagatcctgcttactgatgaagccgaaaagatt
gctgctgaaaaatacaaaattgccagcgagcgctatgttctgggcaacctgagcattagc
gatctcagtatcgcctttcaggaaaatgacagagcaaaacgagattatgtttcatccctg
cgcgatttctggggtgcttactaccagctccgttacctctcgctttacgatttcgaaaaa
aacagaaaaataacctattaa
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