Pedobacter sp. KBS0701: FFJ24_018190
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Entry
FFJ24_018190 CDS
T06361
Name
(GenBank) TolC family protein
KO
K12340
outer membrane protein
Organism
pek
Pedobacter sp. KBS0701
Pathway
pek01501
beta-Lactam resistance
pek01503
Cationic antimicrobial peptide (CAMP) resistance
pek02020
Two-component system
pek03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
pek00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
FFJ24_018190
09132 Signal transduction
02020 Two-component system
FFJ24_018190
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
FFJ24_018190
01503 Cationic antimicrobial peptide (CAMP) resistance
FFJ24_018190
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pek02000
]
FFJ24_018190
02044 Secretion system [BR:
pek02044
]
FFJ24_018190
01504 Antimicrobial resistance genes [BR:
pek01504
]
FFJ24_018190
Transporters [BR:
pek02000
]
Other transporters
Pores ion channels [TC:
1
]
FFJ24_018190
Secretion system [BR:
pek02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
FFJ24_018190
RTX toxin transporter
FFJ24_018190
Multiple protein transporter
FFJ24_018190
RaxAB-RaxC type I secretion system protein
FFJ24_018190
Antimicrobial resistance genes [BR:
pek01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
FFJ24_018190
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
FFJ24_018190
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
QDW26646
LinkDB
All DBs
Position
4516524..4517834
Genome browser
AA seq
436 aa
AA seq
DB search
MSKKLKILILLLSLSLSAFAQEKLSLQEAITIALQNNYDIKISKNQIDIAKNNANIGNAG
MLPNLTGNYTNGGSIQNTRQTPATGPDRVITGAKSTNNSYGADLNWTIFDGFSMFANYDR
LKELQKQGELNSRLTILTTVADVITAYYDVVRQQQLVIAADSAMDVSVLRTNIANTKLQL
GRGSKLDVLTAQVDYNTDTSNYLQSKNALQVAKIRLNQLMVRDIGTMFSVDSNIDVDKGI
LYSKMAEMAEQQNPNVQNAFINQRIASLNLKSIRGARYPSVSLNSGYSRANSTSPTGFNQ
KFAANGFTYGVTASINLFNGFLQRQNERNARIDIENSTLTLSKTKLDVNSQLLTAYQNYS
TYLDLIKLEQRNVDIAKENLDITLAKYRLGSIAPLELREAQRNAIDAQNRFIEMQYQAKI
AETNLKAISGTIDLSK
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagaaattaaaaatattgattctgttattaagcctatcgctttcggcctttgca
caagagaaactgagcttacaggaggccatcaccattgctttacagaataactacgatata
aaaatcagcaaaaaccagatcgatattgcaaaaaacaacgccaatatcggtaatgcgggg
atgttgcctaatttaaccggaaattataccaatggtggaagtatccaaaatacacgccaa
acgccagcaacaggcccagatagggtaattacgggtgcaaaaagtaccaataacagctat
ggtgccgacttaaactggactatttttgacggttttagcatgtttgccaattatgaccgc
ttgaaagaactgcaaaaacaaggcgaacttaattcgaggttaaccatcttaaccaccgtt
gccgatgtaattacagcttattatgatgtggtgaggcaacaacaactggttatagcggca
gatagcgccatggatgtttcagtgttgcgcaccaatattgctaataccaaattacaatta
ggccggggttcaaagctcgatgtattaaccgcacaagttgattacaataccgacacttca
aattacctgcaaagcaaaaatgctttacaggtagctaaaattcgtttaaaccaattaatg
gttcgcgatattggcacaatgttttctgtagatagtaatattgatgtagataaaggtatc
ttatatagtaaaatggccgaaatggccgagcagcagaatcccaatgtgcaaaatgcgttt
attaatcaacgcattgcttccttaaatttaaaatctatccgtggggcccgctatccgtca
gttagcctaaactctggctatagcagggcaaatagtaccagcccaacaggttttaaccaa
aaatttgccgccaatggatttacctatggcgttacggcaagtatcaacttatttaatggt
tttttacaaagacagaatgagcgaaatgccaggatagatattgaaaactcgaccttaacc
ttaagcaaaaccaaactcgatgtaaactcgcaattgctcacggcttatcaaaattacagt
acttaccttgatctgatcaaattagagcaacgcaatgtggatattgcaaaagaaaacctt
gatatcacgctggcaaaataccggttgggaagcatcgctcctttagagctaagagaagca
caacgtaatgccatcgacgcgcaaaaccgctttattgaaatgcagtatcaggcaaaaata
gccgaaacaaacttaaaagcaattagtggaactatagatttatcgaaatag
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