Pedobacter endophyticus: IZT61_06315
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Entry
IZT61_06315 CDS
T07452
Name
(GenBank) TolC family protein
KO
K12340
outer membrane protein
Organism
pex
Pedobacter endophyticus
Pathway
pex01501
beta-Lactam resistance
pex01503
Cationic antimicrobial peptide (CAMP) resistance
pex02020
Two-component system
pex03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
pex00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
IZT61_06315
09132 Signal transduction
02020 Two-component system
IZT61_06315
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
IZT61_06315
01503 Cationic antimicrobial peptide (CAMP) resistance
IZT61_06315
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pex02000
]
IZT61_06315
02044 Secretion system [BR:
pex02044
]
IZT61_06315
01504 Antimicrobial resistance genes [BR:
pex01504
]
IZT61_06315
Transporters [BR:
pex02000
]
Other transporters
Pores ion channels [TC:
1
]
IZT61_06315
Secretion system [BR:
pex02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
IZT61_06315
RTX toxin transporter
IZT61_06315
Multiple protein transporter
IZT61_06315
RaxAB-RaxC type I secretion system protein
IZT61_06315
Antimicrobial resistance genes [BR:
pex01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
IZT61_06315
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
IZT61_06315
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
HGTP_anticodon
His_Phos_2
Motif
Other DBs
NCBI-ProteinID:
QPH40876
UniProt:
A0A7S9L1P9
LinkDB
All DBs
Position
1565847..1567304
Genome browser
AA seq
485 aa
AA seq
DB search
MKELLFIAIMICCHLTTFAVDKTDTLKLTLPQVVEMAKANSIAAKQATTVKETKYWEWRT
FKSNYQPQLELEGVLPGYTKTYTQVQQPNGTILFQPVHYDNSSLTLNFSQSIAATGGTIY
GTTQLQRFADFDRKNVLYNGIPYGIGYTQPILQFNSLKWDKKIEPLKYNESKQTFIETQE
KISITVTEYFFDLLLAQVNLDIAELNYANTKRILSIADTKFDLGKISKNEILQLQLEVLN
SQKAVGTANRDVEIATLNLRSYTGIEGDDRIKLEMPEVVAQMSVATEKVLAEAFENRSDA
IGFIRRLAEARRDVAKAKGENGLKATLRANLGFSNAALTAFDVYRNPKNQQSIELQLSIP
VMDWGRSKSRTKTAQANEQFVTYAVEQDKQTFKQQIVTQVTLFNMMKEQIKLTDAAEKIA
AEKYKIASERYVLGNLSITDLSIAFQENDAAKRDYVSSLRDFWGAYYQLRYLSLYDFEKN
MKIIY
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaactgctatttattgcgattatgatttgttgccacttaacaacctttgccgtt
gacaaaacagacaccttaaaactgaccttgccgcaggtggtagaaatggccaaagccaat
tctattgctgctaaacaggccacaacagttaaagaaaccaaatattgggaatggcgcacc
tttaagtccaattatcagccgcaacttgagctggaaggcgttttgcccggttataccaaa
acctatacgcaagtgcaacagcccaacggaactattctttttcaacccgttcattacgat
aactcgtcgctaacgctgaattttagccaaagcattgcggcaacaggcggtactatttac
ggcaccacgcagttgcagcgatttgccgatttcgataggaaaaatgtgctctacaacggc
atcccctacggcattggttacacgcaacccattttgcagtttaacagcttaaagtgggat
aaaaagattgaaccgctgaaatacaatgagagtaagcaaacttttattgaaacgcaggaa
aaaatatcgattaccgttaccgaatacttttttgatttgctgctggcacaggttaacctc
gatattgccgaactgaattatgccaacaccaaaaggattttatctattgccgatacaaaa
tttgacttgggcaagatttcgaaaaatgaaattcttcagttgcagctcgaggtgctcaac
tcgcaaaaggcagtgggaacggccaaccgcgacgtagaaattgccacgctcaacctgcgc
agttacactggcattgagggcgacgaccggattaagctcgaaatgccagaggttgtggcg
caaatgtcggtggccaccgaaaaagtattggccgaggcttttgaaaaccggtctgatgcc
attggctttatccgcaggttggccgaggcccgaagagacgtggccaaagccaagggcgaa
aatggtttaaaggctactttaagggcaaacctcggtttctctaatgcggccttaactgct
tttgatgtgtaccgcaacccgaaaaaccagcagtcgattgagctgcaattgtctattccg
gtgatggactggggacgatcgaaatcgcgaacgaaaaccgcccaggccaacgagcaattt
gtcacctacgccgttgagcaagataaacagacgtttaaacagcaaattgtaacgcaggtt
accctttttaatatgatgaaagaacaaattaaactaaccgatgccgccgaaaaaattgca
gcagaaaagtataagatcgccagcgaaaggtatgttttgggcaacctcagtattaccgat
ctcagcatcgcctttcaggagaacgatgccgccaaaagagattacgtttcttcgcttcgc
gatttttggggcgcctattaccagcttcggtatttatcactttacgactttgaaaaaaat
atgaagataatttattga
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