Pedobacter endophyticus: IZT61_13145
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Entry
IZT61_13145 CDS
T07452
Name
(GenBank) TolC family protein
KO
K12340
outer membrane protein
Organism
pex
Pedobacter endophyticus
Pathway
pex01501
beta-Lactam resistance
pex01503
Cationic antimicrobial peptide (CAMP) resistance
pex02020
Two-component system
pex03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
pex00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
IZT61_13145
09132 Signal transduction
02020 Two-component system
IZT61_13145
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
IZT61_13145
01503 Cationic antimicrobial peptide (CAMP) resistance
IZT61_13145
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pex02000
]
IZT61_13145
02044 Secretion system [BR:
pex02044
]
IZT61_13145
01504 Antimicrobial resistance genes [BR:
pex01504
]
IZT61_13145
Transporters [BR:
pex02000
]
Other transporters
Pores ion channels [TC:
1
]
IZT61_13145
Secretion system [BR:
pex02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
IZT61_13145
RTX toxin transporter
IZT61_13145
Multiple protein transporter
IZT61_13145
RaxAB-RaxC type I secretion system protein
IZT61_13145
Antimicrobial resistance genes [BR:
pex01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
IZT61_13145
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
IZT61_13145
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
QPH38045
UniProt:
A0A7U3Q5G8
LinkDB
All DBs
Position
complement(3245613..3246932)
Genome browser
AA seq
439 aa
AA seq
DB search
MIPKSIRLMLVASLIPAALFAQSTKELNINQAIELGIANSKNLKRAQNKIDQAAAQLEVV
KDNALPTANASFMYNHAEIPTHTFSLGDGASVLNLPNRADAFVGTAAVQELVYGGGKLKY
AKESTKLLAQVAQLDADISKEDITYAVISTYYSLYKIEQSKKVVNQNLESIAAQIKQAQR
FFEQGIVTKNDVLRFQLQQANVTLTQMDIESNRKVVNYNLDILLGWPEDTEIKIVDPSAG
LKAASSLNDYIGLAMANRQELKQLDVQNKVADYNIKTIKANTRPTVGVGANLYYINPSGS
FIPPVNQYLLPVTVGATVSWNIGSLWTNKNKVSEARIQQSEIAIQKDILSDQVKTDINRN
YQNYQVAVNKIEVLETSIAQAAENDRLLASKYKNNVASVTDRIDAETLLYQAKINLEIAK
ADAGLAYYTLLKSTGKITQ
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgatacccaaatcaattagattaatgcttgtggcatcgttaattccggcggctttgttt
gcacaaagcacaaaggagctaaatatcaatcaagcgatcgaacttggcatagccaatagt
aaaaatttaaaacgtgctcaaaacaagatagatcaggcggcggcgcagcttgaagttgtt
aaagacaacgcgcttcctaccgccaatgcgagttttatgtacaatcatgcagaaattccc
acccacacttttagcctgggcgatggcgcttctgttttaaatttacccaacagggccgat
gcttttgtgggtacagcagcggtacaagagttggtttatggcggcggcaagctcaaatat
gccaaagaatcgactaagttattggcgcaggtagcgcaattagatgccgatataagtaaa
gaagatattacatacgcggtaatcagcacctattattcgctttataaaattgagcagagc
aaaaaggtggtaaaccaaaatctcgaatcgattgctgcccaaattaaacaggcacaacgc
ttttttgagcagggaatagtaaccaagaacgatgttttgcgtttccaattgcaacaggca
aacgttacgctgacccaaatggatatagaaagcaaccgcaaagtggttaactataacctt
gatattttgttgggctggccggaagatactgaaatcaaaattgtcgatccatcggctggt
ttaaaggcggcaagctcgttaaacgattacattgggttggcaatggcaaatcgccaggag
ttgaaacaacttgatgtgcaaaacaaggttgccgattacaacattaaaaccattaaggcc
aatacgagacctactgttggtgtaggtgccaatttatattacattaacccgagcggtagt
tttattccgccggtaaaccaataccttttgcctgttactgtaggcgccacggtttcgtgg
aatatcgggtcgctttggacaaataaaaataaagtaagcgaggcgaggatccaacaaagt
gaaattgccattcaaaaagatattttatcggatcaggttaaaaccgatatcaacagaaac
taccaaaactatcaggtagcggttaacaagattgaggttttggaaacatctatcgcccag
gcggccgaaaacgaccggttactggcatcgaaatacaagaataatgtagcttcggttacc
gacagaattgatgcagaaactttgctatatcaggcaaaaataaacttagaaatagcgaag
gccgatgcaggtttggcatactacacattacttaaatcaacaggaaaaataacgcaataa
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