Pedobacter endophyticus: IZT61_20920
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Entry
IZT61_20920 CDS
T07452
Name
(GenBank) TolC family protein
KO
K18139
outer membrane protein, multidrug efflux system
Organism
pex
Pedobacter endophyticus
Pathway
pex01501
beta-Lactam resistance
pex02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pex00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
IZT61_20920
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
IZT61_20920
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pex02000
]
IZT61_20920
01504 Antimicrobial resistance genes [BR:
pex01504
]
IZT61_20920
Transporters [BR:
pex02000
]
Other transporters
Pores ion channels [TC:
1
]
IZT61_20920
Antimicrobial resistance genes [BR:
pex01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
IZT61_20920
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
IZT61_20920
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
IZT61_20920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
PAV1-137_bromodom-like
Motif
Other DBs
NCBI-ProteinID:
QPH39472
UniProt:
A0A7S9PZB5
LinkDB
All DBs
Position
5137387..5138790
Genome browser
AA seq
467 aa
AA seq
DB search
MKRFNIFSIVLLALIWGGCSVSKDLSLPENLAPRMFRNTAPTDSSSIGDLPFKQFISDLT
VQNLIDTALVKNYDMQIALKNIDAAEVLFKQSKLGYLPELKLQVAASSSRPSDNSLNGLS
LNQFTGSTHIEDYSANLGVFWEADIWGKIRNQKAGALASFLQTEEARKAVQTRLVANVAQ
GYYNLLMLDAQLEIAKKNLRLNDSTLRIIHLQFDAGQVTSLAIQQAEAQQLNAAQLIPRL
EQSVTLQENALSVLIGTLPQAINRDSRLDKMVIPQDLKAGFPSALLSRRPDIKSAELALD
VANARVGVAKASLYPSLVITASGGVNSFKASNWFNVPASLFGLVSGGITQPIFQRGQLKS
SLELAKIDREKTVIAFRQSVLNAVGEVSDELTKVEKLKAQYSIAEKRAQTLQQASKNASL
LFKSGMANYLEVITAQGNLLQSELELATIKTEQLNAVVGLYRSLGGR
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgaaacggtttaatattttttccatcgtgctccttgcgttaatctggggcggatgttcg
gtttcgaaagatttatcattgccagaaaatctggcgccaagaatgttcagaaacactgcg
ccgactgactcgtcgagcattggcgatttgccctttaagcaatttatcagcgatcttact
gtccaaaatctgattgacacggcgttggtgaaaaattacgatatgcagattgcattgaag
aatattgatgctgcggaggtgttgtttaagcaatcgaagttgggttatttgccagagtta
aagttgcaggttgcagcaagttcgagccgcccatctgacaatagtttgaacggcttaagc
ttaaatcagtttacgggttcgacacatattgaggattacagcgctaatttgggcgtgttt
tgggaggctgatatctgggggaagatccgcaatcagaaagcgggtgctttggctagtttt
ttacaaacggaggaagcccgtaaggcggttcaaacacgtttggttgcgaatgtggctcaa
ggttattataatttgttaatgctggatgcgcaactggaaatagcgaaaaagaatttgcgg
ttaaatgacagcactttacggattatacatttacagtttgatgcgggtcaggtaacatcg
ttggccattcaacaagctgaggcgcaacagctgaatgcggcgcaattgattccgcgtttg
gaacagtcggttaccttgcaagagaatgcgttaagcgtgttgatcggtacgttgccgcag
gcgattaatcgggacagtcgattggataaaatggtgattccgcaggatttgaaagcgggt
ttcccttcggccttgttaagtcgcaggcccgatattaagtcggccgaattggcgttggat
gtagcgaacgcaagggtgggcgtggcaaaagccagtttgtacccgtcgttagtaattacg
gcgagcggtggggtaaattcgtttaaagcaagcaactggtttaatgttcctgcgtctttg
ttcggtttggtttcgggcggtataacgcaaccgatcttccagcggggacaattgaaatcg
agtctggagttggcgaagatcgatcgggaaaagacagtgattgcgtttcgtcagtcggta
ttaaatgctgttggcgaggtgtcggatgagctgaccaaggtagagaaactgaaagcgcag
tatagtatcgccgaaaagcgggcgcaaactttgcaacaggcttcgaagaatgcaagtttg
ttgtttaaaagcggtatggcaaattatttggaggtgattacggctcaggggaacttgctg
caaagtgaactggaattggccacgattaaaacggaacagctgaatgcggtggtaggtttg
tataggtcgttggggggcaggtga
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