Pseudomonas synxantha LBUM223: VO64_0082
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Entry
VO64_0082 CDS
T03769
Name
(GenBank) Heavy metal RND efflux outer membrane protein, CzcC family
KO
K18139
outer membrane protein, multidrug efflux system
Organism
pfb
Pseudomonas synxantha LBUM223
Pathway
pfb01501
beta-Lactam resistance
pfb02024
Quorum sensing
Module
pfb_M00642
Multidrug resistance, efflux pump MexJK-OprM
Brite
KEGG Orthology (KO) [BR:
pfb00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
VO64_0082
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
VO64_0082
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pfb02000
]
VO64_0082
01504 Antimicrobial resistance genes [BR:
pfb01504
]
VO64_0082
Transporters [BR:
pfb02000
]
Other transporters
Pores ion channels [TC:
1
]
VO64_0082
Antimicrobial resistance genes [BR:
pfb01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
VO64_0082
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
VO64_0082
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
VO64_0082
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
FAM92
Motif
Other DBs
NCBI-ProteinID:
AKA80628
UniProt:
A0AAU8TCY0
LinkDB
All DBs
Position
100088..101497
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AA seq
469 aa
AA seq
DB search
MGLAMLLSACAIGPDYQRPEVIEPVQFKEAQGWRQANPSDSLARGAWWELYGDRQLNDLV
VRLNTSNQTVAQAEARFRQAQALVRSSRGAFYPSVDLSVGKTRASQGTGSSSASLSSSSS
GIRDTLNAQLGVSWEADIWGKLRRGLEANEASAEASSADLAAMRLSQQSELVQSYLQLRV
MDEQTRLLQATLDTYQRSLKMTENQYRAGVAGKDAIAQAQTQLKTTQASLIDLIWQRAQL
ENAIAVLIGEAPANFNLAVSKEIPALPQIPVSLPSQLLERRPDIASAERSVIAANANIGV
AKAAYYPDLSLSLQGGYSSSTYEDWISLPNRFWSVGPKLAMTLFDGGQRSAEVDRTVASY
DETVAKYRQTVLDGFREVENYMVQLKVLADEAVVSNEALESARESLRLTENQYKAGLIAY
LDVVTVQATALSNERTVLNLLQSRLVASVQLIAALGGGWDGQTSLAEKE
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
gtgggcctggccatgttgctcagcgcttgcgccatcggccctgactaccagcgcccggag
gtcatcgagccggtgcaattcaaggaggcccagggctggcgccaggccaaccccagtgac
tccctggcccgtggcgcctggtgggagctgtacggcgaccgccaactgaatgacctggtg
gtgcgcctcaacacctccaaccagaccgtcgcccaggccgaagcacgttttcgccaggcc
caggcactggtgcgcagttcacgcggggcgttctaccccagcgtcgacctgagcgtcggt
aaaacccgcgccagccagggcaccggcagcagcagcgcgagcctcagcagctccagcagc
ggtattcgcgacaccctcaatgcgcagttgggcgtgagttgggaggccgatatctggggc
aagttgcgccgtggtctggaggccaatgaagccagcgccgaggccagctcagccgatctg
gccgcgatgcgcttgagccaacaatcggaactggtgcaaagctacctgcaactgcgggtc
atggacgaacagacacgcctgctgcaagccacgctggacacctaccagcgctcattgaag
atgaccgaaaaccaataccgcgccggtgtagccggcaaggacgccattgcccaggcgcaa
acccagctcaagactacccaggccagtctgatcgacctgatctggcagcgcgcccaactg
gaaaacgccatcgccgtattgatcggggaagccccggccaacttcaacctggccgtgagc
aaggaaatcccggcactgccacagataccggtgagcctgccatcccagttgctcgaacgc
cgccccgacatcgcttcggcggaacgttcggtgatcgccgccaacgccaatatcggcgta
gccaaggcggcgtactacccggacctcagcctgagcctgcagggcggctattccagcagc
acctatgaggattggatcagcctgccgaaccgcttctggtcggttgggcccaaattggcg
atgaccctctttgatggcggccagcgctcggcggaagtcgaccgcaccgtggccagctat
gacgagaccgtggccaagtaccgccagacggtgctggatggtttccgtgaggtggaaaac
tacatggtgcaactcaaggtactggcggacgaggcggtggtcagcaatgaagcgctggag
tcagcgcgagagtcgttgcgcctgaccgagaaccagtacaaggcggggttgattgcctat
ctggacgtggttaccgtgcaagcgacggccctgagtaacgagcgtacggtactgaacttg
ctgcagtcgcggctggtggcgagtgtgcagctgattgcggcactgggcggaggctgggac
ggccagacctccctggccgaaaaggagtga
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