Pseudomonas synxantha LBUM223: VO64_0958
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Entry
VO64_0958 CDS
T03769
Name
(GenBank) Outer membrane component of tripartite multidrug resistance system
KO
K18139
outer membrane protein, multidrug efflux system
Organism
pfb
Pseudomonas synxantha LBUM223
Pathway
pfb01501
beta-Lactam resistance
pfb02024
Quorum sensing
Module
pfb_M00642
Multidrug resistance, efflux pump MexJK-OprM
Brite
KEGG Orthology (KO) [BR:
pfb00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
VO64_0958
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
VO64_0958
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pfb02000
]
VO64_0958
01504 Antimicrobial resistance genes [BR:
pfb01504
]
VO64_0958
Transporters [BR:
pfb02000
]
Other transporters
Pores ion channels [TC:
1
]
VO64_0958
Antimicrobial resistance genes [BR:
pfb01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
VO64_0958
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
VO64_0958
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
VO64_0958
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OEP
ZYG1
Motif
Other DBs
NCBI-ProteinID:
AKA81504
LinkDB
All DBs
Position
complement(1076070..1077521)
Genome browser
AA seq
483 aa
AA seq
DB search
MNTRAFSLVLAAMTLAGCANYSGLDTQGQRLDANTLQAGKSLGGMTLSNAAWPAADWWKS
LGDPQLDSLIAEALQNSPDMQVADARAHQAEAAAYAANAARMPTLDASAGVSRSRLAKDQ
DPRGQGDAYSTVRNIGASFNYNFDLWGGQRAAWEAALGEARAAEVDQQAARLTLAANVAK
AYSDLGQAHIVRDLAVDDLKRTRQMLDLSKRRLSSGIDSEYQYQQTESLEASSQSQLIDA
EKQLQSAKIALAVLLGKGPDRGNELARPAVLKPSAVAVPSVLPAELLGRRPDLIAARWRV
EAASKNIDASKTRFYPNLNLSASAGAESLLGDAMFGSASRFFNIAPTISLPIFDGGRLRA
DLDARDADYDLAVAQYNKTLVQALGDIGTTLSQLRDTGRQIQAQQHAADIAQQSYDTGVQ
RYSSGIGNYLDVLSIEQQLLQAQRQLAALNAAQIDLSIQLMQALGGGYNASNVAATTPAT
RTE
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgaacacacgcgcattcagcctggtgctggcggcgatgacgttggccggttgcgccaat
tacagcggtctcgacacacaaggccagcgcctcgacgccaataccctgcaagccggtaaa
tccctcggcggcatgacgttgtcgaacgctgcctggccggctgccgactggtggaaaagc
cttggcgacccacagctcgacagcctgatcgccgaagccctgcaaaacagccccgacatg
caagtggccgacgcccgtgcccatcaggccgaagccgctgcctatgccgccaacgctgcg
cgcatgccaaccctggatgccagcgccggcgtcagtcgttcgcgcctggccaaggaccag
gaccctcgcgggcagggcgatgcgtactcgacggtgcgtaatatcggcgccagcttcaac
tacaactttgacctgtggggcggccagcgcgccgcctgggaagccgccttgggcgaggcc
cgcgccgcggaagtcgaccaacaggccgcacgcctgaccctggccgccaacgtggccaag
gcctacagcgacctgggccaggcgcatatcgtgcgcgacctggcggtcgacgacctcaag
cgcacccgccagatgctcgacctgagcaagcgccgcctgagttccggcatcgacagcgaa
taccaataccagcagaccgagagcctggaagccagctcccagtcgcagctgatcgatgcg
gaaaaacaactgcaaagcgccaagatcgccctggcggtgttgctcggcaaaggcccggat
cggggtaacgagttggcccgtccggcggtgctcaagcccagcgccgtcgccgtaccttcg
gtattgcccgccgagctgctcggccgtcgtcccgacctgatcgcagcacgttggcgggta
gaagcggcgagcaagaacatcgacgcaagcaagacccgcttctaccccaacctcaacctg
agcgcgagcgccggggccgagtcgttgctgggggacgcgatgttcggttcggccagccgt
ttcttcaacattgcaccgacgatttcgctgccgatcttcgacggcggccgcctgcgtgcc
gacctcgacgcccgcgacgccgattacgatctggccgtggcccagtacaacaagaccctg
gtgcaagccttgggcgatattggcaccaccctctcgcaactgcgcgacaccgggcggcag
atccaggcccagcaacatgccgccgacatcgcccagcagtcgtacgacaccggggtgcag
cgctacagctcaggcatcggtaattacctggatgtgctcagcatcgagcagcaattgctg
caggcccagcgtcagctggcggccctgaatgcggcgcagatcgacctgtcgattcaactg
atgcaggccctgggtggcggatacaacgccagcaacgtggctgcgaccaccccagctaca
cgcacggaataa
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