Pseudomonas synxantha LBUM223: VO64_1019
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Entry
VO64_1019 CDS
T03769
Name
(GenBank) hypothetical protein
KO
K18139
outer membrane protein, multidrug efflux system
Organism
pfb
Pseudomonas synxantha LBUM223
Pathway
pfb01501
beta-Lactam resistance
pfb02024
Quorum sensing
Module
pfb_M00642
Multidrug resistance, efflux pump MexJK-OprM
Brite
KEGG Orthology (KO) [BR:
pfb00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
VO64_1019
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
VO64_1019
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pfb02000
]
VO64_1019
01504 Antimicrobial resistance genes [BR:
pfb01504
]
VO64_1019
Transporters [BR:
pfb02000
]
Other transporters
Pores ion channels [TC:
1
]
VO64_1019
Antimicrobial resistance genes [BR:
pfb01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
VO64_1019
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
VO64_1019
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
VO64_1019
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
HH_AprE
SIKE
Motif
Other DBs
NCBI-ProteinID:
AKA81565
UniProt:
A0AAU8TRY7
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All DBs
Position
1152956..1154374
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AA seq
472 aa
AA seq
DB search
MRPRLKPLAALMLLALQGCSMAPTYTMPRVDLPTHYREQTSDGPWHSAQPSDQLAPEWWK
LYNDPTLDNLQQRLLQANPDLAAALAHFDASQAYASQLHAGLFPQLTASAQPLRQRQSDS
RPLRGSTQPSVYNSNTAGFSLSYDLDLWGKIRNQVAAGNAQAQASADDLAVARLSLQHHL
ASLYVQLNGLDAQGRILDSSLEDFRQALQLTRNRYEGQIASELDLTRAQNQLAQAKAERD
EVRGQRNLTEHAIGELVGVATSDFSLPPSPQLLALPGVPSQLPSHLLQRRPDIAAAERRV
FAANANIGVAKAAWYPDFSLTGLIGGQTQGVGNLLSAGNRYWALGPLLNLPIFDGGRLSA
NERQAKAEFEEASAQYRSQVLKAVREVEDNLGQLRDLQQQAQDEQAAADAALHTQALAMN
SYQAGAVSYLDVVTAQTAALQAQRTLQAVQTRQLQASVGLVTALGGGWQPGA
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgcgcccaaggcttaaacccctcgccgcactgatgctgctggcattgcaggggtgctcg
atggcgcccacctacacaatgccgagggtggacctgccgactcattaccgcgaacagacc
agcgacggaccgtggcacagcgcacaaccgtccgaccaattggcgcccgaatggtggaag
ctctacaacgacccaacgctggataacctgcaacagcgcctactccaggccaaccccgac
ctggcggcagcgctggcgcatttcgatgcgtcccaagcgtatgccagccagttgcatgcc
ggcctgttcccgcaactcaccgccagtgcacaaccgctgcgccagcgacaatcggattcg
cgaccgttgcgggggagcacgcagccgtcggtgtacaacagcaacaccgccggcttttcc
ctgagctatgacctcgacctgtggggcaaaatccgcaaccaggtggctgccgggaatgcc
caggcgcaagcgtccgcggatgacctggcggtggcgcgattgagccttcaacaccacttg
gcgagcttgtatgtgcagctcaatgggttggatgcacagggccggatactcgacagctca
ctggaggatttccgccaggcgctacagctgacccgcaaccgttatgaaggccagattgct
tcggagctggacctgacccgcgcacaaaaccaactggcgcaagccaaggccgaacgcgat
gaagtgcgtgggcaacgcaacctgaccgagcatgccattggtgaattggtgggggtggcg
accagcgatttttcattgccgcccagcccccagttgcttgcgttgccaggggttccgtcg
cagttgccgagccacctgctgcaacgccgcccggacatcgccgcggcggaacgacgggtg
tttgcggccaacgcgaatatcggcgtggccaaggccgcgtggtatccggatttcagcctg
accgggttgattggcgggcaaacccaaggcgtgggtaacctgctgtctgcaggcaatcgc
tattgggcgctggggccgctgttgaatctgccaatctttgatggagggcggttgagtgcc
aacgaacgccaggccaaggccgagtttgaagaggcatcggcgcagtaccgtagtcaggtg
ttgaaagccgtgagagaggtcgaagataacctggggcagctaagggatttgcagcagcaa
gcgcaggatgaacaggcagcggcggatgcggcgctgcatacccaagccctggcgatgaac
agctatcaggccggggccgtgagttacctggatgtggtcaccgcccagacagcggcgttg
caggcgcagcggacattgcaggcggtgcagacgcggcagttgcaggcgagtgtgggactc
gtgaccgcactcggcggcggctggcagcctggggcctga
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