Pseudomonas fitomaticsae: KJY40_07575
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Entry
KJY40_07575 CDS
T08740
Symbol
emhC
Name
(GenBank) efflux RND transporter outer membrane subunit EmhC
KO
K18139
outer membrane protein, multidrug efflux system
Organism
pfit
Pseudomonas fitomaticsae
Pathway
pfit01501
beta-Lactam resistance
pfit02024
Quorum sensing
Module
pfit_M00642
Multidrug resistance, efflux pump MexJK-OprM
Brite
KEGG Orthology (KO) [BR:
pfit00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
KJY40_07575 (emhC)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
KJY40_07575 (emhC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pfit02000
]
KJY40_07575 (emhC)
01504 Antimicrobial resistance genes [BR:
pfit01504
]
KJY40_07575 (emhC)
Transporters [BR:
pfit02000
]
Other transporters
Pores ion channels [TC:
1
]
KJY40_07575 (emhC)
Antimicrobial resistance genes [BR:
pfit01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
KJY40_07575 (emhC)
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
KJY40_07575 (emhC)
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
KJY40_07575 (emhC)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OEP
Helical_needle
Phage_int_CB
Motif
Other DBs
NCBI-ProteinID:
UFQ01540
UniProt:
A0ABY3Q5V9
LinkDB
All DBs
Position
complement(1696791..1698251)
Genome browser
AA seq
486 aa
AA seq
DB search
MSKSLLSIAVAAFVLSGCSLIPDYQQPEAPVAAQFPQGPAYSPAQAPAQAAAEQGWKQFF
HDPALQQLIQVALENNRDLRVAALNIDAYAAQYRIQRADLFPAVSANASGSRQRVPARAS
QTGESSITSSYSATVGISAYELDLFGRVRSLSEQALQQYFATEEARRSTQISLVASVANA
YLTWQADKELLKLTQDTLGAFEESYKLTSRSNEVGVASALDLAQSRTSVENARAQLARYT
RQVAQDENSLTLLLGTGVPANLQAAKPLSDDLLADVPAGLPSDLLQRRPDILQAEYNLKA
ANANIGAARAAFFPSISLTANAGSLSPDLSGLFKGGSGTWLFQPQINLPIFNAGSLRASL
DYAKIQKDIGVANYEKSIQTAFQEVADGLAARQTYTEQLQAQRDFVAANQDYYRLAERRY
RIGVDSNLTFLDAQRQLFSAQQSLITDRLAQLTSAVNLYKALGGGWNAQTAQNEPLKEEA
PKMKLF
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagtcgctactctccatcgcagtcgccgccttcgtgctgagcggttgctcgctg
ataccggattatcagcagcctgaagcaccggtggccgcgcaattcccgcagggcccggcg
tactcgccggcccaggcgccggcgcaggccgctgccgagcagggctggaagcagtttttc
catgaccctgccctgcagcagctgatccaggtcgccctggaaaacaaccgcgacctgcgt
gtcgcggcgctgaacatcgacgcctacgcggctcaataccgcatccagcgtgccgacctg
ttcccggccgtgtcggccaatgccagcggcagccgtcagcgggttccggcccgtgcgtcg
cagaccggtgagtcgagcatcaccagctcctactccgccaccgtcggcatcagcgcctac
gaactcgacctgttcggtcgggttcgcagcctgagcgaacaagcgctgcaacaatacttc
gccaccgaagaagcgcgccgcagcacccagatcagcctggtggccagtgtggccaacgcc
tacctgacctggcaggccgacaaggaactgctgaagctgacgcaggacaccctcggtgcc
ttcgaggaaagctacaagctgaccagccgcagcaacgaagtcggtgtggcttcggcactg
gacctggcgcagtcgcgtacctcggttgaaaacgcccgggcacaactggcgcgttacacc
cgacaggtcgcccaggacgaaaacagcctgaccctgctgctcggcaccggcgtgccggcc
aacctgcaagcggccaagccactgtcggatgacctgctggccgacgtgccggccggcctg
ccgtcggatctgctgcaacgccgtccggacatccttcaggccgagtacaacctgaaggcg
gccaacgccaacatcggcgcagcccgtgcagcgttcttcccgagcatcagcctgaccgcc
aatgcgggcagcctgagcccggacctgtccggcctgttcaagggcggttcgggcacgtgg
ctgttccagccgcagatcaacctgccgatcttcaacgccggcagcctgcgcgccagcctc
gattacgccaagatccagaaggacattggcgtggcgaactacgagaagtccattcaaacg
gccttccaggaagtcgccgacggcctggccgcccgccagacctacaccgagcagttgcag
gcccagcgtgatttcgtcgccgccaaccaggattactaccgcctggccgagcgtcgctat
cgcatcggcgtcgacagcaacctgaccttcctcgatgcccagcgacagctgttcagcgcg
caacaatcgctgatcaccgaccgcctcgcgcaactgaccagtgcggtcaacctgtacaag
gcactgggcggtggctggaatgcgcagaccgcgcagaacgagccgctcaaagaagaagcg
ccgaagatgaagttgttctga
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