Pseudomonas frederiksbergensis: PFAS1_18070
Help
Entry
PFAS1_18070 CDS
T04786
Name
(GenBank) multidrug transporter
KO
K18139
outer membrane protein, multidrug efflux system
Organism
pfk
Pseudomonas frederiksbergensis
Pathway
pfk01501
beta-Lactam resistance
pfk02024
Quorum sensing
Module
pfk_M00642
Multidrug resistance, efflux pump MexJK-OprM
Brite
KEGG Orthology (KO) [BR:
pfk00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PFAS1_18070
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
PFAS1_18070
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pfk02000
]
PFAS1_18070
01504 Antimicrobial resistance genes [BR:
pfk01504
]
PFAS1_18070
Transporters [BR:
pfk02000
]
Other transporters
Pores ion channels [TC:
1
]
PFAS1_18070
Antimicrobial resistance genes [BR:
pfk01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
PFAS1_18070
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
PFAS1_18070
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
PFAS1_18070
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
APV41168
LinkDB
All DBs
Position
complement(3892251..3893711)
Genome browser
AA seq
486 aa
AA seq
DB search
MSKSLLSLAVAAFVLGGCSLIPDYQQPEAPVAGQYPQGPAYSSAQAPAQAAAEQGWKQFF
HDPALQQLIQIALENNRDLRVAALNIDAFAAQYRIQRADLFPAVSANGTGSRQRVPARAS
QTGQADITSSYSATVGISAYELDLFGRVRSLSEEALQKYFATEEARRSTQISLVASVANA
YLTWQADKELLKLTQDTLAAFEESYKLTARSNEVGVASALDLAQSRTSVENARAQMAKYT
RQVAQDENSLVLLLGTGVPANLQAAKPLADDLLSEVPAGLPSDLLQRRPDILQAEYNLKA
ANANIGAARAAFFPSISLTANAGTLSPDLSGLFKGGSGTWLFQPQINLPIFNAGSLRASL
DYSKIQKDIGVANYEKSIQTAFQEVADGLAARQTYTDQLQAQRDFVTANQDYYRLAERRY
RIGVDSNLTFLDAQRQLFSAEQVLITDRLAQLVSAVNLYKALGGGWNEQTAKNEPLKEEA
PKMKLF
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagtcgctactttccctggctgttgccgccttcgtgctcggtggctgctcgctg
attcccgattatcagcagcctgaagcaccggtggcgggccagtacccgcaaggtccggcg
tattcgtcggcccaggcgccggcccaggctgctgctgaacagggctggaagcagtttttc
catgacccggcgctgcaacaactgatccagatcgctctggaaaacaaccgtgacctgcgt
gtcgcggcgctgaacatcgacgcctttgcggctcaataccgcatccagcgtgccgatctg
ttcccggccgtgtcggccaacggcactggcagccgtcagcgggtcccggctcgggcctcg
cagaccggccaagcggacatcaccagttcctactcggccacagtcggcatcagcgcgtat
gagctcgacctgttcggtcgggttcgcagcctgagcgaagaagcgctgcaaaagtacttc
gccactgaagaagcgcgccgcagcacgcagatcagcctggtggccagtgtggccaacgcc
tacctgacctggcaggccgacaaggaattgctgaaactgacccaggacaccctggctgcg
ttcgaggagagctacaagctcaccgcccgcagcaatgaagtgggggtcgcctcggcgctg
gacctggcccagtcgcgtacctcggtggaaaacgcccgcgcgcaaatggccaagtacacc
cgtcaagtcgcccaggatgaaaacagcctggtgttgctgctcggcacgggcgtcccggcc
aatctgcaagcggccaagccgttggctgacgacctgctgagcgaagtgccggccggtctg
ccatctgacttgctgcaacgtcgtccggacatccttcaggccgaatacaacctgaaagcc
gccaacgccaacatcggtgcggcgcgggctgcgttcttcccgagcatcagcctgacagcc
aacgccgggaccctgagccctgacctgtccggcctgttcaagggcggttcgggcacctgg
ttgttccagccgcagatcaacctgccgatcttcaacgccggcagcctgcgcgccagcctg
gattattcaaaaatccagaaagacatcggcgtggcgaactacgagaagtccattcaaacg
gccttccaggaagtcgccgacggcctggccgcgcgccagacctacaccgatcagttgcag
gcccagcgtgatttcgtcaccgcgaaccaggactactaccgtctggccgagcgtcgctat
cgcattggtgtcgacagcaacctgaccttcctcgatgcccagcgtcagctgttcagtgcc
gaacaggtactgatcaccgaccgtctggcgcagctggtcagtgccgtcaatctgtacaag
gcattgggcggtggctggaacgagcagacggcgaagaacgagccgttgaaagaagaagcg
ccgaagatgaagttgttctga
DBGET
integrated database retrieval system
