Pseudomonas fluorescens UK4: HZ99_12005
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Entry
HZ99_12005 CDS
T03319
Name
(GenBank) RND transporter
KO
K18139
outer membrane protein, multidrug efflux system
Organism
pfn
Pseudomonas fluorescens UK4
Pathway
pfn01501
beta-Lactam resistance
pfn02024
Quorum sensing
Module
pfn_M00642
Multidrug resistance, efflux pump MexJK-OprM
Brite
KEGG Orthology (KO) [BR:
pfn00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HZ99_12005
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
HZ99_12005
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pfn02000
]
HZ99_12005
01504 Antimicrobial resistance genes [BR:
pfn01504
]
HZ99_12005
Transporters [BR:
pfn02000
]
Other transporters
Pores ion channels [TC:
1
]
HZ99_12005
Antimicrobial resistance genes [BR:
pfn01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
HZ99_12005
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
HZ99_12005
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
HZ99_12005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
AIG02851
UniProt:
A0A379IIQ1
LinkDB
All DBs
Position
complement(2667137..2668648)
Genome browser
AA seq
503 aa
AA seq
DB search
MPRRISRELKTLSVWALSLAISGCIGTGGIAPQGKRLAANTLATDDAIQSAARDAHWPTL
QWWQAYGDPQLNRWINLAVHGSPSLAEAAARVREARAMAGLAESAEAVQIHGEAALKRHN
WPSDPFYGPGKLDNASTWDNNAALGLSYALDLWGRERNASERAVDLAHMSVAQARQAQLE
LQNNVVRAYIQLSLHYAQRDILTATLAQQQQILDLAQKRLDGGIGTHFEVSQAQTPLPET
HRQLDALDEDIALTRNQLAALAGRGPGEGAKLQRPTLALGAPLKLPSALPAELLGQRPDV
VASRWQVAAQARGIDVAHAGFYPNVDLVGSLGYVATGGGMLEFLTGKKLNYSVGPAITLP
IFDGGRLRAQLGEASAGYDMAVARYNQTLVNALKGISDQLIHRESMAKQQTFAAESVASA
RKTYDIAMIAYQRGLTDYLNVLNAQTLLFRQQQVEQQVQAARLSAHAELVTALGGGLGAG
SDVPAAGTTLASKTPAALAVFDH
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
gtgccgcgtcgcatcagcagagagctgaagactctcagtgtttgggctttatcgttagca
atcagcggctgcatcggaaccggaggaattgccccccaaggcaagcgcctcgccgccaat
accctggccaccgacgacgcgatccagagcgccgcccgggatgcccactggccgaccctc
cagtggtggcaggcctatggcgacccgcaactcaatcgttggatcaacctcgccgtgcac
ggcagcccaagcctggctgaagccgccgcccgggtgcgtgaagcgcgggccatggccggg
ctggccgagtccgccgaggccgtgcagatccacggcgaggccgccctcaagcgccacaac
tggcccagcgaccccttctacggccccggcaaactggacaacgccagcacctgggacaac
aacgccgccctgggcctgagctacgccctcgacctgtgggggcgcgagcgcaacgccagc
gagcgcgccgtcgacctggcgcacatgagtgtcgcccaagcgcgccaggcccagctcgaa
ctgcagaacaacgtggtgcgcgcctatatccaactgtcgctgcattacgcccagcgcgat
atcctcaccgccaccctggcccagcaacagcagatcctcgacctggcgcaaaagcgcctg
gacggtggcatcggcacgcactttgaagtcagccaggcccagactccgttgccggagacc
caccggcaattggacgctctcgatgaagacatcgccctgactcgtaaccaactggcggcc
ttggccggcaggggcccgggggaaggcgcgaaactgcagcggccgaccctggctttgggc
gcgcccctgaaactgccgtcggcactgcctgccgagctgcttggccagcgccccgacgtg
gtcgccagccgctggcaagtggcggcccaggcccgggggatcgacgtggcacacgcgggt
ttctaccccaatgtcgacctggtgggcagccttggctacgttgccaccggcggcggcatg
ctggagtttctcaccggcaagaagctcaactacagcgtcggcccggcgatcaccctgccg
atcttcgacggtggccgcctgcgtgcgcagttgggcgaggccagcgccggctacgacatg
gccgtggcccgctacaaccagaccctggtcaatgcgctcaagggcatcagcgaccaactg
atccaccgtgaatccatggccaagcagcagaccttcgccgccgaatcggtggcctcggcg
cgcaaaacctatgacatcgcgatgatcgcctaccagcgtggcctgaccgattacctcaat
gtgctcaatgcccagaccttgctgtttcgccagcaacaggtcgaacagcaggtccaggcc
gcgcgcctgagtgcccatgccgaactggtcaccgccctgggcggtggccttggcgcaggc
agcgatgtgccggcagcgggcaccaccctcgcgagcaagaccccggcggccctggccgtg
ttcgatcactga
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