Panacibacter ginsenosidivorans: FRZ67_14000
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Entry
FRZ67_14000 CDS
T06131
Name
(GenBank) TolC family protein
KO
K12340
outer membrane protein
Organism
pgin
Panacibacter ginsenosidivorans
Pathway
pgin01501
beta-Lactam resistance
pgin01503
Cationic antimicrobial peptide (CAMP) resistance
pgin02020
Two-component system
pgin03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
pgin00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
FRZ67_14000
09132 Signal transduction
02020 Two-component system
FRZ67_14000
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
FRZ67_14000
01503 Cationic antimicrobial peptide (CAMP) resistance
FRZ67_14000
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pgin02000
]
FRZ67_14000
02044 Secretion system [BR:
pgin02044
]
FRZ67_14000
01504 Antimicrobial resistance genes [BR:
pgin01504
]
FRZ67_14000
Transporters [BR:
pgin02000
]
Other transporters
Pores ion channels [TC:
1
]
FRZ67_14000
Secretion system [BR:
pgin02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
FRZ67_14000
RTX toxin transporter
FRZ67_14000
Multiple protein transporter
FRZ67_14000
RaxAB-RaxC type I secretion system protein
FRZ67_14000
Antimicrobial resistance genes [BR:
pgin01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
FRZ67_14000
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
FRZ67_14000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Sec10_N
FAM32A
Motif
Other DBs
NCBI-ProteinID:
QEC68359
UniProt:
A0A5B8VAR1
LinkDB
All DBs
Position
complement(3324621..3325982)
Genome browser
AA seq
453 aa
AA seq
DB search
MIKKAQLKLILLLLLALLAKQSFAQQILNTYVKEGLDSNLAIRQQSFDLEKAKLDLDRAK
ALFLPQVGVNAQYTLASGGRKIDVPLGDLLNSVYSSLNEITSSTKFPQVQNQSIQFLPND
FQDTKIELSVPIYNPSLGYNKKIKEELINTNQLELNKYKRELVFNIKQAYFQYLQAVKAV
EIYNNALATVNESLRLNEKLVKNNAATKDVILKAKAEVSKVETSLTEAEQNKNNAAAYFN
FLLNKPLESSIDVDSVLVRTLQKEMEVLLDVPSNREELQQLKISEKVLETNLKLNDTYKL
PTLNGFYNAGFQGYGYKFNNDQFYQLGGLQLKWNIFSGNDNKLKFKQAQIDIEALQNQYS
DAEKKLQLQLTTAYNTYRAALKALRSSNDEVISTKEVYRLMQSRYIQGSALQIELIDART
EMTTAELKYSLAQLTVLNKAAELERVMATYKLD
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgatcaaaaaggcacaattgaagctaattcttttgctgctgctagctttgcttgcaaaa
caatctttcgcgcagcaaatactgaatacttacgtaaaagaaggcttggacagcaaccta
gctatcaggcaacaaagttttgacctggaaaaagcaaagctcgatcttgatagagctaaa
gcattgttccttccgcaggtgggtgtaaacgcgcaatacacacttgcttccggcggaaga
aaaatagacgtgcctctaggagacctgcttaatagtgtttatagttccttaaatgaaata
acttcttcaacaaaattcccgcaggtacaaaatcaaagcattcaatttttacccaacgat
tttcaggatacaaagattgagttgagtgtgcctatttacaatccatcccttggctataat
aaaaagatcaaagaagaactgatcaatactaaccagctcgaattgaataaatacaagcgg
gaactagtcttcaatattaagcaggcatactttcaatatttgcaggcagtaaaagcagtt
gaaatttataataatgctttggcaacagtaaatgaaagcttgcgattgaatgaaaagctt
gtaaagaataatgccgctacaaaggatgttatactgaaagcaaaagcagaagtgagtaaa
gtagaaacatctttaaccgaagcagaacaaaacaaaaataatgctgctgcatatttcaat
ttcttactcaataaacctttggaatcttccatagatgttgattcagttcttgttcgaaca
ttacaaaaagaaatggaagttttattagatgttccctcaaaccgagaagaactgcaacaa
ctaaaaatttcagaaaaagttttggaaacaaatctgaagctgaacgacacatacaaacta
ccaacacttaacggcttttacaatgcaggcttccagggttatggttacaagttcaataat
gatcaattctatcaacttggcggtttgcaattaaagtggaatattttcagtggtaacgat
aataaactaaaatttaagcaagcacaaattgatattgaggctttacaaaatcaatacagt
gatgcggagaaaaaattacaattacagttaacaactgcatacaatacttaccgggctgca
ttgaaagcattgcgtagttcaaatgatgaagtaatctcgacaaaagaagtctatcgtcta
atgcaaagtcgttacatacaaggttctgcactacaaatagaattaatagatgcacgaact
gaaatgactactgctgaacttaaatattcactcgcacaactaactgttttaaataaagct
gctgaactcgaaagagtaatggcaacatacaaacttgattaa
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