Panacibacter ginsenosidivorans: FRZ67_17055
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Entry
FRZ67_17055 CDS
T06131
Name
(GenBank) TolC family protein
KO
K12340
outer membrane protein
Organism
pgin
Panacibacter ginsenosidivorans
Pathway
pgin01501
beta-Lactam resistance
pgin01503
Cationic antimicrobial peptide (CAMP) resistance
pgin02020
Two-component system
pgin03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
pgin00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
FRZ67_17055
09132 Signal transduction
02020 Two-component system
FRZ67_17055
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
FRZ67_17055
01503 Cationic antimicrobial peptide (CAMP) resistance
FRZ67_17055
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pgin02000
]
FRZ67_17055
02044 Secretion system [BR:
pgin02044
]
FRZ67_17055
01504 Antimicrobial resistance genes [BR:
pgin01504
]
FRZ67_17055
Transporters [BR:
pgin02000
]
Other transporters
Pores ion channels [TC:
1
]
FRZ67_17055
Secretion system [BR:
pgin02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
FRZ67_17055
RTX toxin transporter
FRZ67_17055
Multiple protein transporter
FRZ67_17055
RaxAB-RaxC type I secretion system protein
FRZ67_17055
Antimicrobial resistance genes [BR:
pgin01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
FRZ67_17055
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
FRZ67_17055
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
DUF4902
B12-binding
Motif
Other DBs
NCBI-ProteinID:
QEC68933
UniProt:
A0A5B8VD64
LinkDB
All DBs
Position
complement(4079340..4080803)
Genome browser
AA seq
487 aa
AA seq
DB search
MKTQLHYIIFLLLLSGKIFCQDSSDTARLSLQDVIAMAKEKSIESKQAATVKETKYWEWR
VYRSNYQPQLLLNGLLPAYSKTFSQVIQPDGTILFQPIHNNNSSLNLSFSQSIAATGGTV
FGTTQLQRFDDFDRKNQLYNTVPFGIGYSQPLFQFNTLKWDNKIEPLKYNESKQAYIESM
EGIAIVASGYFFDLLLAQVNYQIAQTNLENTKKIMQVANEKLDIGKIAKNEILQLQLEQL
KAEKATGVAKRDMEIALLNLRTYTGLQNTDKIALDLPSTIVDMQVTADKVLEQAYANRAD
AIGFARKIAEAQRDVVKAKADNGLNATLTARLGYTQTASTIPKAYQSPQDQQLLQLEFAI
PIMDWGRSKSRTKTAEANLKFAEYSVEQDKQNFTQEIVTQVTLFDMMKGQVELTAKADSI
ASEKYNIAQQRYVLGNLSITDLSIAFQEKDQAKRDYIAALRDFWGAYYQLRYLSLYDFEK
NEKITYK
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgaagacacaactacattatattatttttttactattgctgtcagggaaaatattttgc
caggatagtagtgacactgcaagattgagcctgcaggatgtaatagcaatggcaaaagaa
aaatcaattgaatcgaaacaggcagcaacggtcaaagagacaaagtattgggagtggcgt
gtgtacaggtcaaattaccagccacaacttttattaaatggtttattgcctgcctatagc
aaaacattctcgcaggtaattcaaccagatggtaccattttgtttcaaccaatacacaac
aacaactcctcattaaacctttccttcagccaaagcattgcagccaccggtggcactgta
ttcggtaccacacaattacaaaggttcgatgatttcgacaggaagaaccaattgtataat
acagtaccgtttgggattggttatagtcagccgttgttccagttcaatacgttgaaatgg
gataataaaattgaaccactaaaatataatgaaagcaagcaggcttatatagaatccatg
gaaggtattgcgattgttgccagcggttatttttttgatctccttttggcacaggttaat
taccagatcgctcaaacaaatttggagaacacaaaaaagatcatgcaggtggccaatgaa
aaattagacattggtaaaatagcaaagaatgaaattcttcaattacagcttgagcagtta
aaagcagaaaaagcaactggtgttgctaagcgtgatatggaaattgccttattaaatctc
cgtacatatacaggcctgcaaaacactgataaaattgcgcttgaccttccatcaacgatt
gttgatatgcaggttacagcagataaagttttggagcaggcttatgcaaacagggctgat
gctattgggtttgcaagaaaaattgcagaagcacaaagagacgttgtaaaagccaaagcc
gacaatggtttgaacgcaacacttactgcacgacttggctatacacaaacagcttcaacc
ataccaaaagcctatcaatcgccgcaggatcagcaattgctgcaacttgaatttgccata
ccaataatggattggggaagatcaaaatcaagaacaaaaacagcagaagctaatctgaag
tttgcagaatattcagtagagcaggataagcaaaattttacacaggaaatagtaacacag
gttacattgtttgacatgatgaaagggcaggtggagcttacagcaaaagcagacagcatt
gcttctgaaaaatacaatattgcacagcagcgctatgtactgggcaacttaagtattact
gatcttagtattgccttccaggagaaggaccaggccaaaagagattacatagcagcatta
agagatttctggggtgcttattaccaattacgctatctctccttgtatgatttcgaaaaa
aatgaaaagatcacttataaataa
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