Paraburkholderia ginsengisoli: I6I06_00830
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Entry
I6I06_00830 CDS
T07246
Name
(GenBank) efflux transporter outer membrane subunit
KO
K18139
outer membrane protein, multidrug efflux system
Organism
pgis
Paraburkholderia ginsengisoli
Pathway
pgis01501
beta-Lactam resistance
pgis02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pgis00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
I6I06_00830
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
I6I06_00830
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pgis02000
]
I6I06_00830
01504 Antimicrobial resistance genes [BR:
pgis01504
]
I6I06_00830
Transporters [BR:
pgis02000
]
Other transporters
Pores ion channels [TC:
1
]
I6I06_00830
Antimicrobial resistance genes [BR:
pgis01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
I6I06_00830
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
I6I06_00830
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
I6I06_00830
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
DUF7432
Motif
Other DBs
NCBI-ProteinID:
QQC64082
UniProt:
A0A7T4T8M3
LinkDB
All DBs
Position
1:complement(183554..185353)
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AA seq
599 aa
AA seq
DB search
MQSPVPKRISAAAVLTILLTIAGCASTGGIAPQDHGIEPSSLDAGNAIRAANADAQWPAA
DWWRAYNDPQLNQWIEAAQLGNPSLAAAQARVREAMSMAGVARSALSPQVNGSLSIQRQK
WADNLYYGPGPLAGEQSWNNTGTLALSYHLDIWGKDKNAAERALDAAHASAADARAAQLE
LQGNVVRTYIGMSLDYALLDIAKATLQQQQQIVDLANRRLKGGIGTQLEVSQAETPMPEY
ERQIDEIEEKIALGRNQLAALAGKGPGAGDTIQRPTLSLAAAPAGLPSALPADLIGHRPD
VVAARWTVAAQARGIDVAKANFYPDINLLASIGGYAAMGPLFQFLKNPSHSWSAGPALSL
PIFDGGRLRSQLGAASAGYDEAVERYNQSIVGALKDISDQVIRIRSLATQSGDAERSVAA
AQKNYDLSREGYKRGLTDYLNVLIAQNQLLRAQEGVAKIQAERLGAHASLVTALGGGLDD
PANGPQANETLPAHGKGKSHAAPTTGDASAKSDGVATQTDAASHADGSEPVEGNAATAAG
KPAAESARAAAPANATLGPAAHRTRAAKSTATATSTTTPAAAATPRAVATAGVATSAAE
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
gtgcagtctccggtaccaaaaaggatctctgcagccgcggttcttacgatcctattaaca
atcgccggctgtgcaagtaccggaggcattgcgccgcaagaccacggcatcgagccgtcc
tcgctcgacgccggcaacgcgatccgcgcggcgaacgccgacgcccaatggccggccgcc
gactggtggcgcgcctataacgatccgcaactgaaccaatggatcgaagccgcgcaactg
ggtaacccgagcctcgcggccgcgcaggcgcgcgtgcgcgaggcgatgtcgatggcgggt
gtcgcccgctcggcgttgtcgccgcaggtcaacggcagtctgtcgatccagcgtcagaag
tgggccgacaacctgtactacggcccggggccgctcgcgggcgagcaatcgtggaacaac
accggcacgctcgcactgtcgtatcacctcgacatctggggcaaggacaagaacgccgcc
gagcgcgcgctcgacgccgcccatgccagcgccgcggatgcgcgcgccgcccagctcgaa
ctgcagggcaacgtggtgcgcacgtacatcgggatgtcactggactatgcgctgctcgac
atcgccaaggccacgttgcaacaacagcagcaaatcgtcgacctggctaaccgccgtctg
aaaggcggcatcggcacgcagctcgaagtgagccaggccgaaacgccgatgccggagtac
gagcgccagatcgacgaaatcgaagaaaagatcgcgctcggccgcaatcagctcgccgcg
ctggcgggcaagggtccgggcgcgggcgacacgatccagcgccctacgctgtcgctcgcg
gccgcgccggccgggttgccgagcgcgttgccggcggatctgatcggccatcggccggac
gtggtcgcggcgcgctggaccgtcgccgcgcaggcgcgcggcatcgacgtcgccaaggcc
aacttctatccggacatcaacctgctggcgtcaatcggcggatatgcggcaatggggccg
ctctttcagttcctgaagaacccgtcgcatagctggagcgcggggccggcgctgtcgctg
ccaatcttcgacggcggccgtctgcgctcgcaactcggcgcggcctcggccggttacgac
gaagcggtggagcgctacaaccagtcgatcgtcggcgcgctgaaagacatctcggatcag
gtgatccgcatccgctcgctcgccacgcagtccggcgatgccgagcgctcggtcgcggct
gcgcagaagaattacgatctgtcgcgcgaaggttacaagcgcggtctgaccgactatctg
aacgtgctgatcgcgcagaatcagttgctgcgcgcgcaggaaggcgtcgcgaagatccag
gccgagcggctgggcgcacatgcgtcactggtcacggcgctgggcggcgggctcgacgat
ccggccaacggtccgcaggcgaacgaaacgctgccggcgcacggcaagggcaagagccac
gccgcgccgactacgggagatgcttccgcgaagtcggacggcgttgccacccaaacggac
gcggcgagccacgcggacggctccgagcctgttgaaggcaatgccgcgaccgccgcaggc
aagcccgccgcggaatcggcacgcgccgccgcgccggcaaacgcgacgctcggccccgcg
gcccaccgcacacgcgccgccaaaagcaccgcaaccgccacgagcacaacgacgccggca
gccgccgccacaccgcgcgcggttgccaccgccggcgtcgccacgtccgcggccgagtga
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