Paraburkholderia ginsengisoli: I6I06_28405
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Entry
I6I06_28405 CDS
T07246
Name
(GenBank) TolC family protein
KO
K12340
outer membrane protein
Organism
pgis
Paraburkholderia ginsengisoli
Pathway
pgis01501
beta-Lactam resistance
pgis01503
Cationic antimicrobial peptide (CAMP) resistance
pgis02020
Two-component system
pgis03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
pgis00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
I6I06_28405
09132 Signal transduction
02020 Two-component system
I6I06_28405
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
I6I06_28405
01503 Cationic antimicrobial peptide (CAMP) resistance
I6I06_28405
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pgis02000
]
I6I06_28405
02044 Secretion system [BR:
pgis02044
]
I6I06_28405
01504 Antimicrobial resistance genes [BR:
pgis01504
]
I6I06_28405
Transporters [BR:
pgis02000
]
Other transporters
Pores ion channels [TC:
1
]
I6I06_28405
Secretion system [BR:
pgis02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
I6I06_28405
RTX toxin transporter
I6I06_28405
Multiple protein transporter
I6I06_28405
RaxAB-RaxC type I secretion system protein
I6I06_28405
Antimicrobial resistance genes [BR:
pgis01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
I6I06_28405
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
I6I06_28405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
QQC67922
UniProt:
A0A7T4TC66
LinkDB
All DBs
Position
unnamed:2412..3848
Genome browser
AA seq
478 aa
AA seq
DB search
MVRTFLVVTCAAALLCPSGAEAQWFDVYGTQKLVSGTPAAPLLKNVSCQPVVVDHSIELE
EAILQAVCANPQARQAWAAARAQAAAVGLDEAAYLPTLSATGGYERDTLSTTYDASAFGQ
GSLRSSQNSSSKYGMLNLSWVLFDFGKRRAALRQASQLLAAANATQDDVLQTVFFDAARA
YYAVRDAQASVDAARQTEDIAKESLAEASAKHNAGAGTLSDQLQAQTTYRRAVIDRVNAE
GDARTAIGTLAVAMGFDANTPVRVAPSEPTTSSAEFSEGVDQLIEEAKARQPKLVAARAK
LEAARANVEAARAEGRPTISLLGSLTQNNPSYQQQPQSLPITGSRGSTIGIQVTIPLFEG
FASDYRVAQAQAQADAQEADMQNTDLQVSLDVWRSYQSLQADMANMDNSKALLADAQRSL
GIARGRYKAGVGTVTELLNSQTALADAQKQRVLAVSKWRTARLRLASSLGNLGLWNNK
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atggttcgaacgtttctcgttgtcacgtgcgcggcggcgttgctctgtccgtcaggcgcc
gaagcccagtggtttgacgtctacggcacgcaaaagctcgtctccggcacgcccgctgcg
ccgttgctgaagaacgtgtcatgccagcctgtcgtggtcgatcattcgatcgagctggag
gaggctattctccaggcggtctgcgcgaaccctcaggcgcggcaggcctgggcggcggca
cgcgcgcaggcggcggccgttggtctcgacgaggcggcgtatctgccgacattgagtgca
acggggggatacgaacgggacacgctctcgacgacgtatgacgccagtgcattcggccag
ggctcgctcaggagttcgcaaaattcgtccagcaaatacggcatgctgaatctgagctgg
gtgctgttcgatttcggcaaacgcagagccgccttgcggcaggccagccagcttctcgcc
gcggccaatgcgacacaggacgacgtgttgcaaacggtgtttttcgatgcagctcgggct
tattacgccgtgcgcgacgcccaggcttcggtcgatgccgcgcggcagacagaggacatt
gcgaaggaaagcctcgccgaggcgagcgcgaaacataatgcaggcgctggcacgttgagt
gatcaattgcaggcacagacgacctatcgccgcgcagtgattgaccgtgtgaacgccgaa
ggtgacgcacgcacggcgataggcacgctggccgtcgcgatgggcttcgacgcgaatacg
ccggtgcgggtcgctccttcggagccgacgacaagcagcgctgaattcagcgaaggcgtg
gaccagttgattgaagaggcaaaagcacgacagccgaaactggtggctgcccgcgccaaa
ctggaagcggcgcgggcgaatgttgaggcggcgcgggcggagggccggccgacgatttca
ctgctcggcagcctgacccagaacaacccgtcttatcagcaacaaccccagtcgcttccg
atcaccggcagccggggcagcacgatcggcattcaggtgacgatcccgctgttcgaaggc
ttcgcttccgactaccgcgttgcacaggcgcaggcacaggccgacgctcaggaagcggac
atgcagaacaccgatctgcaagtgtcgctcgacgtgtggagaagctatcagagtttgcag
gccgacatggcgaacatggacaactcgaaagctctgctcgccgacgcgcaacgctcgctt
ggcatcgctcgcggccgctacaaggcgggggttggtaccgtcaccgagctactgaattcg
cagacggcgctcgccgacgcgcagaagcaacgtgtgctggcagtgtcgaagtggcgtacc
gcgcggctcaggctcgcgtccagtctgggaaatctggggttgtggaacaacaagtaa
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