Pedobacter gandavensis: QG516_15300
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Entry
QG516_15300 CDS
T09013
Name
(GenBank) TolC family protein
KO
K12340
outer membrane protein
Organism
pgj
Pedobacter gandavensis
Pathway
pgj01501
beta-Lactam resistance
pgj01503
Cationic antimicrobial peptide (CAMP) resistance
pgj02020
Two-component system
pgj03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
pgj00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
QG516_15300
09132 Signal transduction
02020 Two-component system
QG516_15300
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
QG516_15300
01503 Cationic antimicrobial peptide (CAMP) resistance
QG516_15300
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pgj02000
]
QG516_15300
02044 Secretion system [BR:
pgj02044
]
QG516_15300
01504 Antimicrobial resistance genes [BR:
pgj01504
]
QG516_15300
Transporters [BR:
pgj02000
]
Other transporters
Pores ion channels [TC:
1
]
QG516_15300
Secretion system [BR:
pgj02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
QG516_15300
RTX toxin transporter
QG516_15300
Multiple protein transporter
QG516_15300
RaxAB-RaxC type I secretion system protein
QG516_15300
Antimicrobial resistance genes [BR:
pgj01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
QG516_15300
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
QG516_15300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Synaptonemal_3
E1_UFD
Motif
Other DBs
NCBI-ProteinID:
WGQ07925
LinkDB
All DBs
Position
3666179..3667654
Genome browser
AA seq
491 aa
AA seq
DB search
MKTRAHFFLIVSLCTAIVFSSKMASAQAADTLRLALTEVVAMAKEQSIASKQAATLKETR
YWEFMTYKSNYQPQLSLKGILPGYSKSSISVQQPDGTIDFRSVHNNNSSLDLSFSQRISQ
TGGTIYGTTSLQRFDDFDRNNTLYNGVPYGVGLVQPLFQFNSLKWDRRIEPLKYNESQQA
YIESMEQISINASTYFFDLLLAQVDLQIAETNLSNTNAIQKIADTKFEMGKVSKNEILQL
QLEALKAEKAVGIAKRDMEMATYNLKVYTGLQNTDKIRLSLPKSTVAMTVVTEKALSEAF
QNRSDAIAFGRKLEEAKRDVAKAKGDNGINATVNANLGFAKSGRSIGSVYQNPKDQQLLE
LAIEIPILDWGRQKSRKKTAMANQQFTQYAVAQDKQNFIQKIITEVNLFEMMKGQLVLNA
RAEQIAAEKYQIAKERYVLGDLSITDLSIAFQENDQAKRDYINSLRDFWGAYYQLRFLSL
FDFEKNEKIKL
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgaagactagagcccactttttccttatcgtatcgctttgcacagcgatcgtattttct
tcaaaaatggcttcggcacaagctgctgatacactgagattggcattaacagaagtagtg
gccatggcaaaggagcaatctattgcttcaaagcaggcggcaactttaaaagaaacccgg
tattgggaatttatgacttacaaatccaattaccagccgcagctctctttaaaagggata
ttgccgggctatagtaaatcctctatttccgtgcagcagccggatggaacgatagatttc
cggtcggtacacaacaacaattcttcccttgatttatcatttagtcagcggatctcacaa
actggcggaaccatttatggcactacgtcattgcagcgctttgatgattttgaccggaac
aatacgctgtataacggcgtcccttatggtgttggtttggtacagccactattccaattt
aattctttaaaatgggaccgcagaattgaacccttaaaatacaatgaaagtcagcaggct
tatattgaaagtatggagcagatttctatcaatgccagcacgtatttctttgacctgctg
ctcgctcaggtagatctgcaaatcgcagaaacaaatttgagcaataccaacgctatccag
aaaattgcagacaccaaatttgaaatgggaaaagtctccaaaaatgagatactccaactg
caattggaagccctaaaagcagaaaaagcagtaggaattgctaaacgcgatatggaaatg
gcaacctataatcttaaagtttatacgggtttgcaaaacacagataagatcagactttct
ttgccaaaatctacggtggcgatgactgtggtcacggagaaagcattatcggaagctttt
caaaaccgatcagatgccattgctttcggccgtaagctggaagaagccaagcgcgatgta
gcgaaagcaaaaggtgataacgggatcaatgccacggtaaatgcgaacctgggttttgca
aaaagcggcagaagtatcggcagtgtctatcaaaatcctaaagaccagcagctgctggaa
ctggctatagaaatccccattctggattggggccgacaaaaatcaaggaagaagacagcc
atggccaatcagcaattcacacaatatgccgtggctcaggataagcagaattttatacaa
aaaatcatcacagaagtaaacctgtttgagatgatgaaggggcagttagtactcaatgct
cgtgcagagcagattgctgctgaaaaatatcagatcgccaaagaacgctatgtgcttggt
gatttgagcatcacagacctgagcatcgcttttcaggaaaacgatcaggcaaaacgcgat
tatatcaattctttacgtgatttttggggcgcctattaccagttgcgtttcttgtcactt
ttcgattttgagaagaatgagaaaataaaactataa
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