Pedobacter ginsengisoli: CPT03_00345
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Entry
CPT03_00345 CDS
T05145
Name
(GenBank) hypothetical protein
KO
K18139
outer membrane protein, multidrug efflux system
Organism
pgs
Pedobacter ginsengisoli
Pathway
pgs01501
beta-Lactam resistance
pgs02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pgs00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CPT03_00345
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
CPT03_00345
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pgs02000
]
CPT03_00345
01504 Antimicrobial resistance genes [BR:
pgs01504
]
CPT03_00345
Transporters [BR:
pgs02000
]
Other transporters
Pores ion channels [TC:
1
]
CPT03_00345
Antimicrobial resistance genes [BR:
pgs01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
CPT03_00345
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
CPT03_00345
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
CPT03_00345
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Glyco_hydro_46
Motif
Other DBs
NCBI-ProteinID:
ATP55022
UniProt:
A0A2D1U068
LinkDB
All DBs
Position
complement(82006..83406)
Genome browser
AA seq
466 aa
AA seq
DB search
MNFRYKSYIIIGFATLCLTACVTKKYERPALNSNDLYRDNSGTDTATIANLPWKTLFGDA
TLQTLIQQGLDENLDLKQAIERIKIAEATLRQSRAAFLPSLTGDLSVTDAKQSRAALNFP
PGININTETQTYKAQLSTSWEADIWGKLSSAKRSAYASLLQTDAAKRAVQTQLIANIANT
YYSLLALDKQLAITEQTVKIRETDVETMKSLKEGAIVNGAAVVQSEANLYAAQVTIPDLK
KSIKETENALSVLLGKGPGTINRNTLDEQQPFSNLQVGVSSQLLQNRPDVQAAEFAFRAA
FENTNTAKTYFYPALTLTANGGLSTLDLKNFFDQSIFYNLIGGITQPIFNKGQNKARLKT
AQAQQQQAFYGFQQTLLTSGQEVSNALFAYQTASEKETTRAKQIASLTKAVDYTKELLRY
SSATNYTDVLTSEQSLLAAKLSSTNDRLQKLQSIVNLYRALGGGWK
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgaactttagatataaatcttatataatcatcggttttgctacgctctgtttaactgcc
tgcgtaactaaaaaatacgagcgaccagccttaaatagcaacgatctttatcgggacaac
tcagggactgatactgcaactattgctaatttaccctggaaaactttatttggtgatgct
acacttcagactttaattcaacaaggattagatgaaaaccttgatttaaagcaggcaatt
gaacgaattaaaattgcagaagcaactttaagacagagcagagcagcctttttaccaagt
ttgactggcgatttgtcggttactgatgcaaagcaatccagagcagcgttaaactttcct
ccgggaataaatattaatacagaaacgcagacctataaggcacaattaagtactagctgg
gaggccgacatatggggtaaacttagtagtgccaaaagatcggcatacgcttcattgtta
caaacagatgcggcaaaaagggctgtacaaacacaacttatagccaatattgccaatact
tattacagcctgcttgctttggataaacaattagcaattacagaacaaactgtaaaaatc
agagaaacagatgttgagaccatgaagtccttaaaggaaggggcaatagttaatggagca
gcagtagtacaaagtgaagctaacttatatgcagctcaggtaacaattccggatcttaaa
aaaagtataaaagaaacggaaaatgcacttagcgtccttttaggaaaaggccccggtact
atcaaccgaaatactttagatgaacaacaaccatttagtaatttacaggtaggtgtgtct
tcacaacttttgcaaaacagaccggatgtacaggcggcagaatttgcttttagggcagca
tttgaaaacaccaatacagcaaaaacatacttctaccctgccttaacattaactgcaaat
ggtggattatctactcttgaccttaaaaatttctttgatcagtctatattttataatctg
attggtggaattacgcaacctatctttaataagggacaaaacaaagcgagactaaaaact
gcgcaggctcaacagcaacaagcattttatggctttcagcaaacgctcttaaccagcgga
caggaagtttcgaacgcattatttgcctaccaaactgcttctgaaaaagaaacaacccga
gcaaaacaaattgcttctcttaccaaagcggtagattatactaaagagttgcttcgttat
agctctgctactaattatacagacgttctaacttctgagcaaagtttacttgctgccaag
ctgagcagcacaaatgatcggttacagaaacttcaatctattgtaaatttatacagagcc
cttggtggcggttggaaatag
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