Pedobacter ginsengisoli: CPT03_02275
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Entry
CPT03_02275 CDS
T05145
Name
(GenBank) hypothetical protein
KO
K12340
outer membrane protein
Organism
pgs
Pedobacter ginsengisoli
Pathway
pgs01501
beta-Lactam resistance
pgs01503
Cationic antimicrobial peptide (CAMP) resistance
pgs02020
Two-component system
pgs03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
pgs00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
CPT03_02275
09132 Signal transduction
02020 Two-component system
CPT03_02275
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
CPT03_02275
01503 Cationic antimicrobial peptide (CAMP) resistance
CPT03_02275
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pgs02000
]
CPT03_02275
02044 Secretion system [BR:
pgs02044
]
CPT03_02275
01504 Antimicrobial resistance genes [BR:
pgs01504
]
CPT03_02275
Transporters [BR:
pgs02000
]
Other transporters
Pores ion channels [TC:
1
]
CPT03_02275
Secretion system [BR:
pgs02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
CPT03_02275
RTX toxin transporter
CPT03_02275
Multiple protein transporter
CPT03_02275
RaxAB-RaxC type I secretion system protein
CPT03_02275
Antimicrobial resistance genes [BR:
pgs01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
CPT03_02275
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
CPT03_02275
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
YbaB_DNA_bd
Motif
Other DBs
NCBI-ProteinID:
ATP55372
UniProt:
A0A2D1U172
LinkDB
All DBs
Position
562323..563666
Genome browser
AA seq
447 aa
AA seq
DB search
MKILYKFVFLACFLISLQATCQTNWTLDSCINYALSHNLELEQSRIQESSTKLQSELQHA
KKIPSLSISSNLGLSIGRSVDPTTNEFTNKGITYQSYGLQSNLMLFNWFNVRNSIKSVKY
HYQSVSYEVENSKINLKLNLIVAYLSLLEAKKQVKLSNEAILLIHKQILKADSLIVYGRA
SRINSLKLKSQLAKDSSGLYRSRLNLSQTKLELKQLLNLNGKSEFDIIDSMNNTNDHFNY
LLDILPERIVKDVQINHPLQRSSVLEVKSLEYKLKAASAMRMPSLNVNFNVGSNYSSNYK
NMYTNSAGYFDQILNTNLSRSVLFSLSVPVFNQKSLDVNVKQAKINLHELELRNSIRSRD
LEKLIYSAYNDAIANYKDYQQSLEYLKYSEEAYKLDKLLFENGRISAVELLESLNNLNIG
KHNCSSLFYSTILKIMILKLYDNCNSL
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaatactatataagtttgtttttctggcgtgctttctaatttctctacaagctact
tgtcaaactaattggacgcttgatagttgtataaactatgctttgtctcataatttggag
ttagaacaatctaggatccaagaaagttctactaaattacaaagtgaacttcaacatgcc
aaaaagattccatccctctctatatcatctaatctagggctgtcaataggaagatcagtt
gaccccactacaaatgaatttactaataagggaataacttatcaaagttatggattacaa
agtaacttaatgttgtttaactggtttaacgtgagaaattcgataaaatcagtcaaatac
cactatcagtcagtgtcttatgaagttgaaaattcaaaaattaatttgaagttgaactta
attgtggcttatcttagcttactggaagctaaaaagcaggtgaaattatcaaatgaagct
attttgttgattcataagcaaatattaaaggccgactctttgattgtttatggtagagct
agcagaattaattctttaaaattaaaatcccaattggctaaagatagtagtggactatat
cgaagtcgacttaatcttagccagactaaattggagttaaaacagttacttaatcttaat
ggaaaaagtgagtttgatattattgattctatgaataatactaatgatcattttaattat
ttgttggatatcttacctgagaggattgtgaaagatgttcagattaatcatcctctacaa
agatccagtgttttagaagttaaatccctagaatataaattaaaagcggccagcgcaatg
aggatgccttctttaaatgttaattttaatgtaggctcaaattattcgagcaattacaaa
aatatgtatacaaatagtgcaggttattttgaccaaattctaaatactaatttgagcaga
agtgttctcttttctttaagtgtaccggtatttaaccaaaagtctctagatgtcaatgtg
aaacaggccaagataaacctacatgaattagagctgagaaattctattcggtcaagagat
ttagaaaaattaatttattccgcctataatgatgctattgcaaattataaagactatcag
caaagtcttgaatacctaaagtattcagaagaggcttataagctagataagctattattt
gaaaatggaagaatttcagccgttgaattgttggaaagtttaaataatctaaatatagga
aagcataattgctcaagtttattttatagtactattttgaagataatgatattaaaatta
tatgataattgcaattccttataa
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