Pedobacter heparinus: Phep_2257
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Entry
Phep_2257 CDS
T00978
Name
(GenBank) RND efflux system, outer membrane lipoprotein, NodT family
KO
K18139
outer membrane protein, multidrug efflux system
Organism
phe
Pedobacter heparinus
Pathway
phe01501
beta-Lactam resistance
phe02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
phe00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Phep_2257
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Phep_2257
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
phe02000
]
Phep_2257
01504 Antimicrobial resistance genes [BR:
phe01504
]
Phep_2257
Transporters [BR:
phe02000
]
Other transporters
Pores ion channels [TC:
1
]
Phep_2257
Antimicrobial resistance genes [BR:
phe01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
Phep_2257
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
Phep_2257
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
Phep_2257
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
ACU04461
UniProt:
C6XY43
LinkDB
All DBs
Position
complement(2622579..2623988)
Genome browser
AA seq
469 aa
AA seq
DB search
MNAYIKILVILITISILGGCKVSKDIPVPKTAIPEHFRNAERTDSLSIGNQAIVDFFPEK
ELRNLIDTALIRNYDLQIAIKNIESTSQLLKQAKLGNLPQLNLQITGSSNNPSNNSINGL
STSEFLKTSHIEDFNASLGLTWEADIWGKIRSQKQGALATYLQTEEARKTVQTQLIASIA
QGYYRLLMMDAQIGIAKKNLALSDSTLTIVKLQFDAGQVSSLAIQQAQAQQLVSAQLIPK
LQQDITIQENALSMLTGRIPGAIDRKTSLDKTFIPDKPSAGYPSAMVSKRPDVKSAELSL
DIANAKVGVAKAGMYPTLNITATGGVNSFKASNWFNVPASLFGMVSGGLTQPLLQRRQLK
TQYEIAKIDREKTVIQFRQAVLNAVTEVSDELVKIEKLKLQYDISRNRVNTLQQAVRNAN
MLFKSGMATYLEVITAQSNSLQSELELAAIKTAQLSATVELYRSLGGGI
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgaatgcatatataaaaatattagtgatcctgatcactataagtatacttgggggatgt
aaggtatcgaaagacataccagttcctaaaacagccattcctgagcatttcagaaatgca
gagcgcacagattcattgagcataggtaatcaggctatcgtcgacttttttcctgaaaag
gagctgagaaatcttattgatacagctttgataagaaattacgatctgcaaattgcgata
aagaatattgaatcaaccagccagttacttaaacaggctaaacttggcaatcttcctcaa
ttgaacctgcagatcacaggtagttcaaataacccttcaaacaatagtattaatgggctg
agcaccagtgagtttttaaagacaagccatattgaggattttaatgccagcctggggtta
acatgggaagctgatatctggggaaaaataagaagccagaaacaaggagctttggctact
tatcttcagaccgaggaagcaagaaaaaccgtacaaacccaattgatcgccagcattgct
cagggatattacaggttattgatgatggatgcacaaataggcattgccaagaagaatctt
gctttaagtgatagcacattaactattgtaaagttgcaatttgatgccggacaggttagt
tcacttgctatacagcaagcgcaggcacagcaacttgtgtcagcacaactgatccctaag
cttcaacaggacataactattcaggaaaatgccttgagcatgcttactggacgtatcccc
ggagcaattgatcgcaaaacaagtctggacaaaacatttatacccgacaagccatctgcc
ggatatccttctgcgatggtaagtaaaagaccggatgttaaaagtgcagaactgtctctg
gatattgccaatgccaaagtaggggtagcaaaggcaggtatgtatccaacattgaacatt
accgcaactggaggagtaaattcattcaaggccagtaactggtttaatgttccggcttca
ttatttggcatggtttcaggcggacttacccaaccgctattacagagacggcaattgaaa
acacagtatgagatcgctaagatagacagagaaaaaaccgtaattcagtttcgtcaggct
gtccttaatgcagttactgaagtttctgatgaacttgtgaaaatagaaaaattaaaattg
cagtacgatatttccagaaatagggtaaataccttacagcaagccgttagaaatgccaac
atgctatttaaaagtgggatggccacctatcttgaagtcattacggcccaaagtaattcc
ctgcaaagcgaactcgaacttgcagccattaaaacagcacagctcagcgcaactgtagaa
ctttaccggtctttagggggtgggatatag
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