Pedobacter heparinus: Phep_3706
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Entry
Phep_3706 CDS
T00978
Name
(GenBank) outer membrane efflux protein
KO
K12340
outer membrane protein
Organism
phe
Pedobacter heparinus
Pathway
phe01501
beta-Lactam resistance
phe01503
Cationic antimicrobial peptide (CAMP) resistance
phe02020
Two-component system
phe03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
phe00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
Phep_3706
09132 Signal transduction
02020 Two-component system
Phep_3706
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Phep_3706
01503 Cationic antimicrobial peptide (CAMP) resistance
Phep_3706
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
phe02000
]
Phep_3706
02044 Secretion system [BR:
phe02044
]
Phep_3706
01504 Antimicrobial resistance genes [BR:
phe01504
]
Phep_3706
Transporters [BR:
phe02000
]
Other transporters
Pores ion channels [TC:
1
]
Phep_3706
Secretion system [BR:
phe02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
Phep_3706
RTX toxin transporter
Phep_3706
Multiple protein transporter
Phep_3706
RaxAB-RaxC type I secretion system protein
Phep_3706
Antimicrobial resistance genes [BR:
phe01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
Phep_3706
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
Phep_3706
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
DUF6154
RRF
Motif
Other DBs
NCBI-ProteinID:
ACU05897
UniProt:
C6XUA4
LinkDB
All DBs
Position
4417776..4419119
Genome browser
AA seq
447 aa
AA seq
DB search
MNTIIKQIKVIPVLLLGLLLSNTVNAQQTMTLKEALNYAVQNSVKTRKSKLDIDGGKYKT
EEIRAQALPQITGNAGLTYNPIIGQLVANIGGQTQSFKLGQNWNSSAGVQLSQQLFNQTV
FTGLQAAKSSEEYYNLVSQLTEEQIIELVANNYYQVLVNRQQLNVVDNNIKNVKVIEKII
SNQYQNGLAKKIDVDRIKVNLTNLETQREQTLNLITQLENQLKFSMGMPVSTDITLPKTE
LTEVTRLPQFADSLSLANRTEIKILDTQDKLYWLQRKAYVSEYYPSLALTGNYTYSSQSG
SFDFLSSNNTAIGFGSSAVGLTLKVPIFNGFLTRSKIRQADIDIKKAREDRRESTNSLNL
AYENAKIQLRNSLNTINAQKKNAELADEIYRSTQNNYNNGLANLTDLLDTENALTEAQNS
YTQALLNYKIAEIQLIKSNGNIKSLLQ
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgaacacaataattaaacagataaaagtaattccggtattgctactcgggttattgcta
tcaaatacagttaacgctcagcaaaccatgacgttaaaggaagcattgaattatgcagta
cagaacagtgtgaagacacgaaaatccaaactggacattgatggcggaaagtataaaaca
gaggaaatcagagctcaggccctgccacaaattacaggtaatgcaggcttaacttataat
cctattattggccagctggtagcaaatataggtggtcagacccaatcatttaaattgggc
cagaactggaattcttctgccggtgtacagctttcacaacaactgttcaatcaaacagta
tttaccgggcttcaggcagcaaaatccagtgaagagtattataatctcgtttctcaactt
actgaagagcaaattattgaattggttgccaacaattactatcaggttttagtaaacaga
caacaattgaatgtggtagacaacaacatcaaaaatgtaaaagttattgaaaaaatcatt
tctaatcagtatcagaatggcttggcaaaaaagatcgatgtagaccgtattaaagtaaac
cttaccaatttagagacacagcgtgaacaaactttaaatttaatcacacaattggaaaac
cagttgaaattctctatggggatgccggtaagtactgacatcactttacctaaaacagaa
cttacagaggttacccgattaccacagttcgcagactctctttcgctggccaatagaact
gaaatcaaaattttggatactcaggacaaactatactggctacaacgtaaagcttatgta
tcagaatactacccctctttagctttgacaggaaactatacctattccagccagagcggt
agtttcgacttcctaagctccaacaatactgccataggttttggctcctctgctgtcggc
cttactttaaaagtgcctatttttaatggctttctgacccgttcaaaaattcgccaggct
gatatcgatattaaaaaagcaagagaagacagaagagaatcaacaaattcactgaatttg
gcttatgaaaatgcaaaaatccagttacgcaacagtttaaataccattaatgcacaaaag
aaaaatgctgaactggccgacgagatctatagaagtacacaaaacaactataacaatggc
ctcgcaaacttaacagatctgctggacacagagaacgcattaacagaagcacaaaacagc
tatacgcaggcattattaaactataagattgccgaaatacaattaatcaaatcaaacgga
aatataaaatcacttttacaatga
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