Prevotella herbatica: prwr041_10420
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Entry
prwr041_10420 CDS
T08008
Name
(GenBank) transporter
KO
K12340
outer membrane protein
Organism
pher
Prevotella herbatica
Pathway
pher01501
beta-Lactam resistance
pher01503
Cationic antimicrobial peptide (CAMP) resistance
pher02020
Two-component system
pher03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
pher00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
prwr041_10420
09132 Signal transduction
02020 Two-component system
prwr041_10420
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
prwr041_10420
01503 Cationic antimicrobial peptide (CAMP) resistance
prwr041_10420
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pher02000
]
prwr041_10420
02044 Secretion system [BR:
pher02044
]
prwr041_10420
01504 Antimicrobial resistance genes [BR:
pher01504
]
prwr041_10420
Transporters [BR:
pher02000
]
Other transporters
Pores ion channels [TC:
1
]
prwr041_10420
Secretion system [BR:
pher02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
prwr041_10420
RTX toxin transporter
prwr041_10420
Multiple protein transporter
prwr041_10420
RaxAB-RaxC type I secretion system protein
prwr041_10420
Antimicrobial resistance genes [BR:
pher01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
prwr041_10420
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
prwr041_10420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
SrfA
USHBP1_PDZ-bd
Phage_Mu_Gp27
Motif
Other DBs
NCBI-ProteinID:
BCS85149
LinkDB
All DBs
Position
complement(1421138..1422448)
Genome browser
AA seq
436 aa
AA seq
DB search
MIKRFILTITLVVILSVNANSQIVRKMSISDMFQLAESNSRELNSQRTGLEVANEGVKVA
KSERLPDVNVKLNANYMGNILLTDRDFTNVHGYSAFHFGNEFAVDAQQVVYAGGAINANI
KLAQLGKEQAGLGLDMSRENIRFIALGEYLDLQKLQNREKVIEDNVELTAKLIANIEEKH
NQGVALKNDITRYELQMQTLRLTLTKIRNQRSIINHQLCNSLGLVNSEIIQPTDDTASAI
FSKDGETKWQTETADQSQQIKISRLNERIAEQQIKIAKSDFMPKVSLVACNDFNGPITFE
ILSINKNLNAWYVGVGVKYSLSSIFKSNKKLSKAKLAFKNAKEQTDVVGEQLNNQVQAAY
TQYLESYTELETQEKDVELAQQNYKVINERYINQLALITDMLDASNMKLDAELSEVDARI
NIAYAYYKMKYIAGQL
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgattaaaagatttattttgacaatcacattggttgtgattctttctgttaatgccaat
tcgcaaatagtgagaaaaatgagcatcagtgatatgtttcagttggcagaaagcaatagc
cgcgaactaaattcacagcggacaggacttgaagtagctaacgaaggtgtaaaagtagca
aaaagtgaacgcttgccagacgtcaatgtaaaactaaatgccaactatatgggtaacatt
ctgcttactgaccgtgacttcacaaatgttcacggttatagtgcgtttcatttcggaaat
gagtttgctgttgatgcacaacaggtggtttatgccggtggagcaataaatgcaaatata
aaattggcgcaacttggtaaagaacaagctggattaggtctggatatgagtcgcgagaat
atccgttttatagcattaggtgaatatctggatttgcagaaactgcaaaatcgtgaaaaa
gtaatagaagataatgtagaattaacagctaaacttatagctaatattgaggaaaaacat
aaccagggtgttgcattgaaaaatgatataacacgatatgaactgcaaatgcagacgttg
cgtctcacactcacaaagatacgcaatcagcgtagtatcataaatcatcaactatgtaat
tctttaggacttgtaaattctgagattattcaacctacagatgatacggcttctgcaata
ttcagcaaagatggcgaaactaaatggcagaccgagactgctgatcagtcacagcaaatt
aaaatttccagactgaacgagcgtatagctgaacagcaaataaaaatagcaaaaagtgac
tttatgccaaaggtgtctcttgtggcatgcaatgattttaacggacctataacatttgaa
attctgtctattaacaagaatcttaacgcttggtatgtcggagttggagtgaaatacagt
ttgtcgtcaattttcaaaagcaataaaaaactttctaaagcaaaactagcgttcaagaat
gctaaagaacagactgatgttgtgggcgaacagctgaacaatcaggtgcaggctgcctat
acacagtatttggaaagctacacagaattagaaacacaagagaaagacgttgaattggcg
cagcagaactataaagtgataaacgaaagatatataaatcaacttgctcttatcaccgac
atgcttgatgccagcaatatgaaacttgatgccgaacttagcgaggtagatgcacgtatt
aatattgcttatgcatactacaaaatgaagtatatagcaggacaactttaa
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