Pseudopodoces humilis (Tibetan ground-tit): 102110938
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Entry
102110938 CDS
T02921
Name
(RefSeq) interstitial collagenase
KO
K01388
matrix metalloproteinase-1 (interstitial collagenase) [EC:
3.4.24.7
]
Organism
phi
Pseudopodoces humilis (Tibetan ground-tit)
Pathway
phi03320
PPAR signaling pathway
Brite
KEGG Orthology (KO) [BR:
phi00001
]
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
102110938
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
phi01002
]
102110938
Enzymes [BR:
phi01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.24 Metalloendopeptidases
3.4.24.7 interstitial collagenase
102110938
Peptidases and inhibitors [BR:
phi01002
]
Metallo peptidases
Family M10
102110938
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_M10
Hemopexin
PG_binding_1
Reprolysin_3
Reprolysin_5
Reprolysin_4
Peptidase_M54
Peptidase_M66
DUF4953
Peptidase_M91
Metallopep
Reprolysin_2
Motif
Other DBs
NCBI-GeneID:
102110938
NCBI-ProteinID:
XP_005516272
LinkDB
All DBs
Position
Unknown
AA seq
466 aa
AA seq
DB search
MKTFAILLSLYVAVSSAFPVAPEAEDEGKTLQLVESYLQNFYDLQRDHHPHVRSSGENPL
TAKLKEMQSFFGLEVTGKPDLDTLEVMKKPRCGVPDVEKYVFTPGNPKWKRNNLTYRILN
YTPKMRRADVDEAIRKALSVWSNVTPLTFQKVEDKEADIMISFAYRDHRDNSPFDGPNGQ
LAHAFQPGEGIGGDVHMDEEEAWTKDGRGYNLFIVLAHELGHSLGLSHSNDPGALMYPTY
SYTDPNEFLLPQDDIDGIQAIYGQSNVAVQPTGPITPEACDPNLTFDSITTLRGEIFFFK
GRYMLRKHPARTETELNFISLFWPRLPSGIQAAYENVETDEIVIFKEDKYWVIRGYDVLP
GYPKPIYHFGFPKTVKRVNAAYNDETTGKTYFFVADRYWRYDEKKKSMDHGYPKKIVSYF
GNIGRVDAAFQKDGYVYFFHGTTQFQFDPRAKRIVRQMKSTSWFNC
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgaagaccttcgcaattctcctgtcgctatatgtggccgtctcctctgcatttcctgtg
gctccagaagcagaagatgaaggaaaaaccctacagcttgtagagagctatctacagaat
ttctacgaccttcaaagggatcaccatccccatgtaagaagcagcggtgaaaaccccctt
actgcaaagctcaaggaaatgcagtctttctttggactagaagtgacgggaaaacctgat
cttgacacactggaggtgatgaaaaaacccaggtgtggtgtacctgatgtagagaaatat
gtgttcacaccagggaatcccaaatggaaaagaaataatctgacatacaggattttgaat
tacaccccaaagatgagacgagctgatgtagatgaagcaatcagaaaagctctcagtgtc
tggagcaatgtgacaccattgacattccaaaaggttgaggacaaggaggcagatataatg
atctcttttgcttatagagaccaccgtgacaattccccttttgatggtcccaatggacag
ctggctcatgcattccagcctggtgaaggtattggtggagatgtgcatatggatgaggag
gaagcttggacaaaagatggaagaggctacaatttgttcattgttcttgcccatgagctt
ggccattcactgggtctgtctcattcaaatgatcctggagcactgatgtatccaacttac
tcctacaccgatcccaatgaattccttcttcctcaggatgacattgatggaattcaggcc
atttatggacagtctaatgttgctgtgcagccaacaggacccataactccagaagcttgt
gacccaaatttgacatttgattctattactaccctacgtggagaaatattcttcttcaag
ggcagatacatgctgcgcaagcatcctgcaaggacagagacagagctcaattttatctca
ctgttctggccaaggttgccatcaggaattcaagctgcttatgaaaacgttgagacagat
gaaattgtaatttttaaagaggataaatattgggtcatcaggggatatgatgttctaccc
ggctatcccaaaccaatctatcactttgggttcccaaagactgttaaaagagttaatgca
gcttacaatgatgaaaccacaggaaaaacatatttctttgtggctgacagatactggaga
tatgatgaaaagaaaaaatccatggaccatgggtatcccaagaaaatagtctcctacttt
ggaaacattggcagagttgatgctgctttccagaaagatggctatgtgtatttcttccat
ggaacaactcagttccagtttgatcctcgtgccaaacggattgttcgacaaatgaagagc
accagctggtttaattgttaa
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