Pirellula sp. SH-Sr6A: VN12_02545
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Entry
VN12_02545 CDS
T04360
Symbol
oprM_1
Name
(GenBank) Outer membrane protein OprM precursor
KO
K18139
outer membrane protein, multidrug efflux system
Organism
pir
Pirellula sp. SH-Sr6A
Pathway
pir01501
beta-Lactam resistance
pir02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pir00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
VN12_02545 (oprM_1)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
VN12_02545 (oprM_1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pir02000
]
VN12_02545 (oprM_1)
01504 Antimicrobial resistance genes [BR:
pir01504
]
VN12_02545 (oprM_1)
Transporters [BR:
pir02000
]
Other transporters
Pores ion channels [TC:
1
]
VN12_02545 (oprM_1)
Antimicrobial resistance genes [BR:
pir01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
VN12_02545 (oprM_1)
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
VN12_02545 (oprM_1)
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
VN12_02545 (oprM_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Uds1
FAM13A
Motif
Other DBs
NCBI-ProteinID:
AMV30966
LinkDB
All DBs
Position
complement(648559..650238)
Genome browser
AA seq
559 aa
AA seq
DB search
MMSRYSKSWNGRIKRNAFAALIAGTTLIPGCKIPEICRPESMRPLPQTFDRNNDPAQGMV
SDQNSACLGWREFFNDPTLHQLIADSLAGNQELKILAQDIRIANNEYRARRGLLFPFASI
GTSAGIEKSSRFTRDGAVEDQLQAAPGKGFPEPLPNFLIAADVTWEIDIWRRLRNARDAQ
ALRFLGTQAGRNYVVTRVVAEVAENYYELLALDNRLETLDRTIAIQQQSLDTAKALKDAA
RGTELAVQRFQAEVQKNQSEKLIIQQEITETENRINYLAGRFPQKIDRPSVEFLSLYLPA
IGVGFPSQQLLNRSDIRQAEREVAASGLDVRVARAQFFPSLILSAGVGYEAFNTKYLFSS
PESLIYNAAGGLVAPLINRSAIKADYLNANARQLQAVYEYQQTVLNAHIEVINQLSLVEN
YTRSLEVKTQQLQSLESSVDNATKLFQNARGEYIEVLLAQRDMMETRLVLINTKQKQLGA
VIKAYQALGGGGRPGDFVVDELESLEDPMIDTDTTQTTESVPIQIHSAPGKQAFGRSEPA
PIAMVQEAQSATFDIPANR
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atgatgagccgttattcgaaatcttggaacggacgaattaagcgaaacgccttcgctgca
ttgattgcgggaacgacattgattcccgggtgcaagattcccgaaatctgccggcccgaa
tcgatgcgtcccctgccacagaccttcgaccgcaataacgatccagctcaaggaatggtg
agcgatcaaaactccgcatgcttgggttggcgggaatttttcaatgaccccaccctgcat
caattgatcgccgattcgctcgcgggcaaccaagagcttaagattctcgctcaggacatc
cgcatcgccaacaatgaatatcgagccaggcgaggcctgctgttcccctttgcttcgatc
ggaacctccgctggcatcgagaaatcaagccgcttcacacgcgacggtgctgtggaggac
cagctccaagcagcccctgggaaaggttttcccgagcctctccccaatttcttgattgcc
gccgatgttacttgggagatcgacatctggcgcaggctgcgcaatgcccgcgatgctcag
gccctgcgattcctgggaacgcaagccgggcgaaactatgtggtcactcgcgtcgtggcg
gaagttgccgaaaactactacgaattgctcgctctcgacaatcgactcgaaacactcgat
cgaacgatcgccatccaacaacaaagcttggataccgccaaagccctgaaggatgcggcg
cgaggtacagagcttgccgtccaacgctttcaggcggaagtgcaaaagaatcaaagcgag
aagctgatcatccaacaggagatcacggagacggagaatagaatcaattacttggctggt
cggttcccgcaaaagatcgatcgccccagtgttgaattcctttccctctacctgcctgcg
atcggagtcggatttccatctcagcaactgctcaaccgatcggatatccgtcaggcagaa
agggaagtcgctgcctcggggctcgatgtccgcgttgcccgcgctcaattcttcccctca
ctcatcctatcggcgggtgtgggttacgaagcgttcaacaccaagtatctcttctcaagt
cccgaatcgctgatctacaacgcagccggtggacttgtcgcccctctcatcaaccgctcc
gcgatcaaagcagactatctcaatgcgaacgctcgccagttgcaagcggtctacgagtac
caacagaccgttctcaatgcccacatcgaagtcattaatcaactctccttggtcgagaac
tatacgcgaagcctcgaggtcaagacccagcaactgcagtcgttggaatcgtcggtcgac
aatgcaaccaaactcttccagaatgcacggggggaatacatcgaagtcctgctggctcag
cgggacatgatggaaacgcgattggtattgatcaatacaaagcagaagcaactcggagcg
gttatcaaagcctatcaggcgctcgggggtggtggtcgtcccggagacttcgtcgtcgac
gaactggaatcgttggaggatccaatgatcgataccgacacaacgcaaaccacggaatcg
gttccaatccagatccactcggcacctggcaaacaagccttcggtcgatcggagccagct
cccattgcgatggtccaagaagcccagtccgcaacgtttgatatcccagcaaaccgttag
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